Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01299 ATGAACACGTTTTCGCATGTACCTCCAGGCTTTCGGTTTCATCCAACCGATGAAGAGCTGGTAGGTTACTACCTTAGGAAGAAGGTAGCGTCTAAAAGGATTGATCTAGATGTGATCAAAGATGTGGATCTGTATAAAATTGAACCATGGGATCTGCAAGAGTTATGCAAAATAGGAACAGATGAACAAAGCGACTGGTATTTCTTCAGTCATAAAGACAAGAAATACCCAACTGGAACTCGGACGAACAGAGCTACAAAAGCAGGATTCTGGAAAGCGACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTGATTGGGATGAGAAAGACTCTAGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTACAGGCTAGAAACTAATGAAAATGGAACTCCTCCGGAAGAAGGCTGGGTTGTGTGCAGAGTGTTCAAGAAGCGAATGACTACAATGCAGAAAGTGGGAGAGTATGATCAGTCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAGGATTTTGAATCACCCAGGCGCATTTCTCAGCCTTATGCGTCATACCATCAGCAGCAGCACCCCTGCAAGCCGGAGCTCATGGAATTGCAATACAACAACATACCCCACGATGCATTCCTCCAACTTCCTCAACTTGAGAGCCCCAAAGTTACTCACTCAGCAGCCAGTTTGAGTTGCAGCTCAGTTGTCCCTTTTGGTTATGAAAGCAGCAACAACAACAATGGAAGCACCTTGCAGTTCTCTTCACTCACTCAGGAAGAACAGATACAATACTGCCACCAACAAAGTCAAAACTCCCTCTATTGTATCAATGATAATGCTGTTGACCAAGTCACAGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCACAACCAAGATGTTTCCAAGGAGACCAGTTATTCCAATGCACCTATCTTCCATGTGGCTGAACAAATTTCTGTGGTAGCCAATGGATCCAAAAAGGAGCAAATTTCCCAGGAATATGCTTCAACATCTACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1086 0.442 MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPPEEGWVVCRVFKKRMTTMQKVGEYDQSPCWYDEQVSFMQDFESPRRISQPYASYHQQQHPCKPELMELQYNNIPHDAFLQLPQLESPKVTHSAASLSCSSVVPFGYESSNNNNGSTLQFSSLTQEEQIQYCHQQSQNSLYCINDNAVDQVTDWRVLDKFVASQLSHNQDVSKETSYSNAPIFHVAEQISVVANGSKKEQISQEYASTSTSSCQIDLWK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01299 361 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Lapu3g01299 361 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Lapu3g01299 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 273 - -
Lapu3g01299 361 FunFam NAC domain-containing protein 16 160 - -
Lapu3g01299 361 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Lapu3g01299 361 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01299 Lapu-Chr3 14159947 14166104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01299 1 361 NAC Transcription Factor Family AT1G12260 55.754 1.73e-138 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu3g01299 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01299 - - gmx:100783529 672.159