Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01298 ATGGTCAGAAAGTCACAGAAGAACTCCATGTGTGCAATCTTCAAATTGGTGTGGTGTTTTAGACAAGGAACCAATAAATTGTGTTTACCAAAGGGTCATTTGGCAGTGTGTGTAGGCGAATCAGAAGATGAAAAGCAACGGGTTTTGGTGCCTGTTACTCACTTCAATCACCCCCTTCTTGGAAAGCTATTGGAGGATGCAGAGAAAGTTTACGGGTTAGATCATCCAGGTGTAATAACCATACCCTGCACACTCTCTGAGTTCCAGAGAGTTCAGAAGATTATCGCCAACACCCCAAGCTACCACACACGTCTTACAATTTCTTGTTCCATCAACTGA 339 0.4336 MVRKSQKNSMCAIFKLVWCFRQGTNKLCLPKGHLAVCVGESEDEKQRVLVPVTHFNHPLLGKLLEDAEKVYGLDHPGVITIPCTLSEFQRVQKIIANTPSYHTRLTISCSIN* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01298 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 90 IPR003676 GO:0009733
Lapu3g01298 112 Pfam Auxin responsive protein 26 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01298 Lapu-Chr3 14131937 14132275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01298 29 103 Calmodulin-binding Proteins AT3G43120 44.000 1.78e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01298 K14488 - gmx:102668727 170.629