Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01295 ATGGCAACAAAGCTACTGTGGCTTTCTCTGGTGGTTCTGAATCTGGTCCTTCATATTTCTAACACCGCCGAATCCGCAACTACGAAACGATCCAACCCAAAGCCGACAACAGACTTCATCAAGTCCTCATGCAAGGAGACGCTCTACCCCGTGGCGTGCCTTCAAAGCCTCTCAGGCTACGCCAACAAGATTCGGCAGAGCGAGCAAGAACTAGTGATCACTGCCCTGGGCGTGAGCGTATCTAAGACTCGATCATGCGCATCGTATCTCAAAAAGTTGGAGACAGTGAAGGGAATGAAAGGAAAAGAGTACAATGCGGTGCGAGATTGCATAGAGAACATGGATGATAGCGTGGAGCGTCTTAGCCAATCGGTGAAGGAGCTGGGCCTCCTGGTTAAGGCGAAGGGGAAGGATTTCCGGTGGCACATGAGTAATGTTCAGACTTGGGTTAGTGCTGCTATCACTGATCAGGACACGTGTCTTGACGGCTTTGATGGGCCCCATCTTGATGCTACTTTCAAGGCTGCCCTTAAACTTAGGGTTACGGATGCTTCTCAACTCACCAGTAATGCTCTTGCGTTGGTTAATCGCTTTGCCTCCAAGTACCGCACTCAGACGCCATAA 624 0.5032 MATKLLWLSLVVLNLVLHISNTAESATTKRSNPKPTTDFIKSSCKETLYPVACLQSLSGYANKIRQSEQELVITALGVSVSKTRSCASYLKKLETVKGMKGKEYNAVRDCIENMDDSVERLSQSVKELGLLVKAKGKDFRWHMSNVQTWVSAAITDQDTCLDGFDGPHLDATFKAALKLRVTDASQLTSNALALVNRFASKYRTQTP* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01295 207 FunFam Pectin methylesterase inhibitor 1 35 198 - -
Lapu3g01295 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 199 IPR035513 -
Lapu3g01295 207 NCBIfam pectinesterase inhibitor domain 8 196 IPR006501 GO:0004857
Lapu3g01295 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 198 IPR035513 -
Lapu3g01295 207 CDD PMEI-like_3 42 200 - -
Lapu3g01295 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 194 - -
Lapu3g01295 207 SMART PMEI_2 35 194 IPR006501 GO:0004857
Lapu3g01295 207 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01295 Lapu-Chr3 14106070 14106693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01295 23 195 Carbohydrate Esterase AT1G53830 31.111 6.93e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01295 - - gmx:100789460 276.559