Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01268 ACCATGTTTACCCTCTCGACCTTGGTTCTAGTTTTCTGTCTCATTTGCACAGTTTTTTGCTACGCAGGCTTCTACTTTCTCAAACCCAAGACTCAGAGGCTTCCACCGGGCCCACCGGGCCTTCCTTTCTTCGGAAACCTTCTATCTCTTCAACCGGAGCTTCACACTTACTTCGCCGGCTTGGCCCAGATCCATGGCCCAATTTACAAGCTCCGACTCGGGAGCAAGGTAGCCATCGTCATAACTTCACCGGCCGTGGCTCGCGAGGTCCTCAAAGACAACGACACTGTTTTCGCCAACCGCGACGTCCCCGCCGCCGGCAGAGTTGCCACCTATGGCGGGTTTGACATTGCATGGAGCCCCTACGGAGCCGAATGGCGGATGCTGAGGAAAGTGTGCACTGAGAAGATGCTGAGCAACAGCACCCTGGATTCCGTGTACGATCTGCGGCGCAACGAGGTGTGCAAAACGGTGTCGTACTTGTACAACCGAGCGGGGAGTGCAGTGAACGTGGGGGAGCAGGTGTTTCTGACGGTGATGAATGTGATAACCAGTATGATGTGGGGCGCGGCGGTGGAAGGGGCGGAGAGGGAAACTTTGGGGGCGGAATTCAGGGAGTTGGTGGCGGAGACGACGCAGCTTTTGGGGAAGCCCAATGTTTCGGATTTTTTTCCCGCATTGGCCCGGTTGGATTTGCAAGGTGTGGAGAAAGAGATGCAGGTGTTGGTGTCAAGGTTCGATGGGATATTTGAAAGGATGATTGGAGAACGAGTGAAGGTGGATGAAGAAGAAGAAGAAGATGGGAAAAAGAAAGAAAGGAAGGATTTTCTGCAGTTTTTGTTGGATCTGAAGGATTCTGAAGGCGGTGATTCAAAGACACCATTCACCATCACCCACGTTAAGGCCCTCCTCATGGATATGGTTACAGGGGCAACAGACACATCTTCAAACACAATAGAGTTTGCAATAGCAGAAATAATGCATAATCCAGAGATAATGAAGAGAGTGCAAGAGGAGTTGGAAGGTGTAGTTGGGAAAGATAGCATAGTAGAGGAGTCTCACATTCATAAGTTGACCTACTTGAAAGCAGTGATGAAAGAAACCCTTCGATTGCACCCTGTGCTTCCTCTTCTGGTCCCCCATTGCCCCAGTGAAACCACCAATGTGGGAGGCTACACAATTCCAAAGGGGTCTCGAGTGTTCGTTAATGTGTGGGCAATTCATAGAGATCCTTCCATCTGGGAAACACCACTCCAATTTGACCCTACAAGGTTCTTGGATGCAAAGTGGGATTTCAGTGGCAATGACTTCAAGTATTTCCCCTTTGGATCTGGAAGAAGAATCTGTGCAGGAATAGCAATGGCTGAGAGAACAGTTCTATATTTTCTGGCAACACTTCTACACTCATTTGATTGGACAATACCCAGAGGAGAAAACTTGGATGTATCTGAGAAATTTGGTATTGTTCTAAAAAAGAAAATACCTCTTGTTGCCATCCCCACCCCGAGGTTATCCAACCCAGAGCTTTATAAT 1533 0.4905 TMFTLSTLVLVFCLICTVFCYAGFYFLKPKTQRLPPGPPGLPFFGNLLSLQPELHTYFAGLAQIHGPIYKLRLGSKVAIVITSPAVAREVLKDNDTVFANRDVPAAGRVATYGGFDIAWSPYGAEWRMLRKVCTEKMLSNSTLDSVYDLRRNEVCKTVSYLYNRAGSAVNVGEQVFLTVMNVITSMMWGAAVEGAERETLGAEFRELVAETTQLLGKPNVSDFFPALARLDLQGVEKEMQVLVSRFDGIFERMIGERVKVDEEEEEDGKKKERKDFLQFLLDLKDSEGGDSKTPFTITHVKALLMDMVTGATDTSSNTIEFAIAEIMHNPEIMKRVQEELEGVVGKDSIVEESHIHKLTYLKAVMKETLRLHPVLPLLVPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWETPLQFDPTRFLDAKWDFSGNDFKYFPFGSGRRICAGIAMAERTVLYFLATLLHSFDWTIPRGENLDVSEKFGIVLKKKIPLVAIPTPRLSNPELYN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01268 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lapu3g01268 511 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PANTHER OS08G0547900 PROTEIN 8 511 - -
Lapu3g01268 511 CDD CYP76-like 62 500 - -
Lapu3g01268 511 FunFam Cytochrome P450 - like protein 24 497 - -
Lapu3g01268 511 Gene3D Cytochrome P450 27 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01268 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01268 Lapu-Chr3 13719360 13722057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01268 4 510 Cytochrome P450 AT4G12300 60.000 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01268 - - gmx:100787507 817.764