LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g01263	ATGGATGCTTTCCTTTTCATTCTTCTCACTTTTGTGTTGAGCTTCCATAGTCATTTTGCTCAAAGAAGTGAACTGCCTCCTACCACAAGCAGTTCCAAAACATATATTATCTATGTGGAGAGGCCACAGGATAAGACACTTGCTCAATTAGATGATTTAGAGAGCTGGTATCATTCATTTATGCCACCTACTATTATGAGCTCTGAGGAACAATCACCAATAATTTATTCATATCGACACGTGATGAGTGGTTTTTCTGCAAGACTCACTGAACAAGAGCTGAGAGAAGTGGAAAAGAAGAATGGCTTTATCTCTGCTCACCCCGAAATGATACTACATCATCAAACCACACGAACCCCACAAGTTTTCGGGTTGCAGCAACAAACGGGAATGTGGAAGGAATCGAACTTTGGAAAGGGAGTAATTGTTGGGGTGCTAGATTCTGGAATCATGCCTAACCATCCTTCATTCAATGATGCAGGAATGCCACCACCGCCACCCAGATGGAAAGGAAGATGTGAACTTAAAGCGACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACCTTGCAGTGAAGGCAAAGAAAGGAGCAGAGGAGCCTATTGATGAAGATGGACATGGGACTCACACAGCAAGCACAGCTGCTGGTGCTTTTGTTGATTATGCAGAAGTACTAGGAAATGCCAAAGGCACTGCAGCAGGGATTGCTCCTTACGCTCATCTGGCAACTTACAAAGTATGCATCGGAGGAGATTGCCTTGAGAGTGATATACTGGCAGCATTGGATGCAGCTGTGGAAGATGGCGTGGATGTAATATCAATATCCCTTGGCCTAAGCGATCCACCTCCTTTTTTCCATGATAACATTGCAATAGGCACATTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTGCGGCGGGGAACTCTGGTCCTTTCCCTGGTTCCTTAGTTAATGGAGCCCCTTGGATCCTCACAGTCGGAGCAAGCAATATTGACAGAAGCATTGTAGCAACAGCAAAGCTAGGAAACGGACAAGAGTTTGACGGAGAATCTGTTTTCCAGCCTTCCAATTTTACTCCGACACTGCTATCCTTAGCATATGCTGGAAATGATAGCAAACATGAAGCTGCAAATTGTGCTAAAGGATCCCTGAATGATATTGATTTCCGCGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGATACAGGAAGAATTGGCAAAGGAAAGGAAGTAAAGAGAGTTGGAGGTGCAGCCATGATTCTCATGAATGATGAAAGCAGTGGCTTCAGTCTCTTAGCCGATGTACATGTTCTACCTGCAACACATGTAAGCTATGATGCTGGACTTAGGATTAAAGCATATATAAATTCCACTGCAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATTAGAAACTCTCTATCTCCTGCCGTTTCATCCTTCTCCTCAAGAGGTCCCAATTTGCCCAGTCCTGGTATTTTGAAACCAGATATCATAGGACCGGGCGTTAACATCCTAGCTGCCTGGCCATTCCCCCTGAACAACAATACTGATTCAAAATCCACTTTCAACATCATGTCCGGCACATCAATGTCATGCCCACATCTTAGTGGCGTGGCCGCTTTGCTCAAAAGCTCTCATCCTCACTGGTCACCGGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACACAATCAATTTTCAACACAAACTCATTGTTGACGAAACTCTTCAACCTGCAGCCCGGGTTAGTTTATGA	1779	0.4424	MDAFLFILLTFVLSFHSHFAQRSELPPTTSSSKTYIIYVERPQDKTLAQLDDLESWYHSFMPPTIMSSEEQSPIIYSYRHVMSGFSARLTEQELREVEKKNGFISAHPEMILHHQTTRTPQVFGLQQQTGMWKESNFGKGVIVGVLDSGIMPNHPSFNDAGMPPPPPRWKGRCELKATACNNKLIGARSFNLAVKAKKGAEEPIDEDGHGTHTASTAAGAFVDYAEVLGNAKGTAAGIAPYAHLATYKVCIGGDCLESDILAALDAAVEDGVDVISISLGLSDPPPFFHDNIAIGTFAAMQKGIFVSCAAGNSGPFPGSLVNGAPWILTVGASNIDRSIVATAKLGNGQEFDGESVFQPSNFTPTLLSLAYAGNDSKHEAANCAKGSLNDIDFRGKVVLCERGGDTGRIGKGKEVKRVGGAAMILMNDESSGFSLLADVHVLPATHVSYDAGLRIKAYINSTATPTATILFKGTVIRNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNNTDSKSTFNIMSGTSMSCPHLSGVAALLKSSHPHWSPAAIKSAIMTSADTINFQHKLIVDETLQPAARVSL*	593

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g01263	592	Pfam	PA domain	381	455	IPR003137	-
	Lapu3g01263	592	Gene3D	Peptidase S8/S53 domain	140	575	IPR036852	GO:0004252\|GO:0006508
	Lapu3g01263	592	Pfam	Subtilase family	138	571	IPR000209	GO:0006508\|GO:0008236
	Lapu3g01263	592	SUPERFAMILY	Subtilisin-like	115	578	IPR036852	GO:0004252\|GO:0006508
	Lapu3g01263	592	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	19	114	IPR037045	-
	Lapu3g01263	592	CDD	PA_subtilisin_like	342	469	-	-
	Lapu3g01263	592	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	143	154	IPR023827	-
	Lapu3g01263	592	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	36	580	IPR045051	-
	Lapu3g01263	592	ProSiteProfiles	Serine proteases, subtilase domain profile.	122	592	-	-
	Lapu3g01263	592	CDD	Peptidases_S8_3	112	570	IPR034197	-
	Lapu3g01263	592	Gene3D	-	336	477	-	-
	Lapu3g01263	592	Pfam	Peptidase inhibitor I9	34	112	IPR010259	-
	Lapu3g01263	592	FunFam	subtilisin-like protease SBT1.5	336	476	-	-
	Lapu3g01263	592	PRINTS	Subtilisin serine protease family (S8) signature	205	218	IPR015500	-
	Lapu3g01263	592	PRINTS	Subtilisin serine protease family (S8) signature	533	549	IPR015500	-
	Lapu3g01263	592	PRINTS	Subtilisin serine protease family (S8) signature	138	157	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g01263	Lapu-Chr3	13662789	13665109	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g01263	33	581	Subtilisin-like Serine Gene Family	AT3G14067	47.183	1.03e-160	477

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g01263	-		-	gmx:100812208	997.653