Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01254 ATGGCTACCAATCAGGAGGAGCACCACATGGATCAAGAGGAAGAGGGAGGAACAACGGACCTCAGCACCAGCGACGCAGACAAAGACTCATCCCAAGCCACCAACCTCAATGGACTTCCCCAAAACTTCCAACACAACACCATAGGCTTCCAAGTCTTGCCGCTCAAAAACGAGCCAACGGACTCCGACCCTGACCCGGATCACAAGATTCCTCCACAGCCGCCGATGCAGCTTCCGCTCAAATCGCCCAGGCGTTCCTCCACCAAGGACCGCCACACTAAAGTCGAAGGCCGTGGCCGCAGGATCCGAATACCCGCAACCTGCGCCGCCCGGATCTTCCAACTCACCCGAGAGCTGGGCCACAAATCCGACGGCGAAACCGTCCGGTGGCTCCTCGAGCACTCCGAGCAGGCCATCATAGAGGCCACCGGTACAGGCACGGTGCCGGCCATCGCGGTCTCCGTCGGCGGCGCGCTCAAAATTCCAACGACGTCGAGCGCCAACCAAAACAACCACGGCGAGGAAGGCGCATCTAACAAGAAACGGAAACGCCCTTCCAACAGCGAGTTCGTGGACATAAACGACGCCGTTTCGCAGACGTCCGGTCTGGCCCCGGTTCAAGTGCCCCAAAGACTGGTCCCCGTCTGGGCCGTAAGTAACCCCAGCATGGTGGTCCCCGCTAACACGTTCTGGATGATTCCGCAGGCCGCAGCCACAAGCAATCCCATGGGCGGAGTTACGGGCCCCGCCAGCCAGCAGCCTCAGATATGGGCCTTATCTCCCTCCGTGTTCAACTTGGCAGCTAGGCCCATATCGCCTCTCGTGACGACAACGAATATTCCAGAAGCCTGGCCCGTCATGACAGGGTGCAGTAACAGTTCTAACTCGGCAGCTGTGAGTACCAGCACGGTGGGAGCTAAGGTGGCTACCAATTCCAGCATGGCCCCTAGTGTTGGTTCCAGCGGCACCAAGACTCAGACTTTGAGAGATTTTTCCCTCCTAATTTACGATAAGCAAGAGTTGCAGTTCTTGGGCCGCTCTGGCACTCACGCCAATCCATGA 1062 0.5847 MATNQEEHHMDQEEEGGTTDLSTSDADKDSSQATNLNGLPQNFQHNTIGFQVLPLKNEPTDSDPDPDHKIPPQPPMQLPLKSPRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHSEQAIIEATGTGTVPAIAVSVGGALKIPTTSSANQNNHGEEGASNKKRKRPSNSEFVDINDAVSQTSGLAPVQVPQRLVPVWAVSNPSMVVPANTFWMIPQAAATSNPMGGVTGPASQQPQIWALSPSVFNLAARPISPLVTTTNIPEAWPVMTGCSNSSNSAAVSTSTVGAKVATNSSMAPSVGSSGTKTQTLRDFSLLIYDKQELQFLGRSGTHANP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01254 353 MobiDBLite consensus disorder prediction 162 187 - -
Lapu3g01254 353 MobiDBLite consensus disorder prediction 17 53 - -
Lapu3g01254 353 MobiDBLite consensus disorder prediction 1 97 - -
Lapu3g01254 353 MobiDBLite consensus disorder prediction 1 16 - -
Lapu3g01254 353 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Lapu3g01254 353 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 322 IPR005333 GO:0003700
Lapu3g01254 353 Pfam TCP family transcription factor 87 183 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01254 Lapu-Chr3 13559683 13560744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01254 50 350 TCP Transcription Factor Family AT2G45680 45.161 5.29e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu3g01254 TCP 8.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01254 - - gmx:100797827 466.848