Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01250 ATGGCTTTCACTGCTGCCAACCCTTTCTCTAATAATTCTCTCATACACACTACAAAGCATCCCCCAAAACCTGCCGTTTTGCTCAAGGACTACCTCAGGGACGACCTCAGTTCCTGTTCATCCAACGGTTTTAAATCGTTGCCGCGCCGACAATGCTGCACCACCGTGGGATTCTTCGTGGACGAAGATCTCCAACTCCATCGCAGAAGAAGGAACACACTCCCTCGACGTCGACGATCAACCGTGTCGGCTCTGCAGAGAGCTTCGGTGGCCGTAATCAACGCGATAAAGTCGCTGCCGATGTCACAAAAGAGTGGTAGAGCGAAGAAAGGTGTTACTACTACTGGCGTTCTCTGCAGAAGCCTCTCGAAGAAGCTGTTGAGTAGAAGCTTCTGGAGAAAAGCAGCAGCAGCGAGGGAAGAGGGAAGCCAAGGCGTGCCGCGGAGGAGGACATCTTTCCGCGAACTCATTATGCTGGATCAGGAACATCATAAAGCGACGTCGTTGAATGAATATACTGCATTAGCTACCCCGAGCTTCACCACTTCTTCTGGTTGTGGCAGTAACAGCTGGGGAGAGAGCGAATTCACGTTCGCATCTACCGGTGCTTCCTCTGAGAGCTCCAACGAAAACTACCTCCAGCTTGAGGCCACCAAAGACTGTGCACCACGACGTCACAAGGTAGAAGAGGTAGTAACCAAGGAATATTGGACAAATGAGAAGGAACAGTTTAGTCCTGTGTCGATACTAGATTGTCCATTTGTAGATGAAGAAGAGATTTACAAGTCTCATTTCAGATCCACTTCCGCTGTTGTTTCCTTCAAGGAAGGAGGGAAACACAAGCGTAGGAACAAAAGATGTCATTTAGAAAGTGTGGCTTCACTGGAGCCAGTGGTTCTGGAGAAAAGGTTCGCGCGGTTAGAGGTGGGGGATGAACCACTCAACCATTCTACAAAGCAATATTTCCGCGTACTAGTGCCCACAGAAGGTACTCAAATTCCTCCAAATAATCACAACATCGAGGAGAATGCTCGCAATCTTCTCAACTTCGTTAAAGGGTCAAACCCATGCAACACTTTGATGATTAAGGCAGAGAACCTGCTGTTTGACTACTTCAAGCAGAGTATTGGAGAATGTAAAGACATTGATCACTCAAAAAAGCTTCACCTTTGCAAGGTAGCAGCAGATTGGATACATGGGCAACCCCAAGAAGTGCATTTGGATTGGGAAGAAGATGGAGGAAGGTGCGTCTACGTTAGGGAGATGGACAAGTGTGAGGAGTGGAAAAACTATGATACAGAAATACAACAATTGGGTGAGGACCTGGCAAACGAAGTCTTCAAAAATCTGGTTAATGAGTTAGCACTTGATCTTGTGACACGTACTAGCCACTGA 1395 0.4746 MAFTAANPFSNNSLIHTTKHPPKPAVLLKDYLRDDLSSCSSNGFKSLPRRQCCTTVGFFVDEDLQLHRRRRNTLPRRRRSTVSALQRASVAVINAIKSLPMSQKSGRAKKGVTTTGVLCRSLSKKLLSRSFWRKAAAAREEGSQGVPRRRTSFRELIMLDQEHHKATSLNEYTALATPSFTTSSGCGSNSWGESEFTFASTGASSESSNENYLQLEATKDCAPRRHKVEEVVTKEYWTNEKEQFSPVSILDCPFVDEEEIYKSHFRSTSAVVSFKEGGKHKRRNKRCHLESVASLEPVVLEKRFARLEVGDEPLNHSTKQYFRVLVPTEGTQIPPNNHNIEENARNLLNFVKGSNPCNTLMIKAENLLFDYFKQSIGECKDIDHSKKLHLCKVAADWIHGQPQEVHLDWEEDGGRCVYVREMDKCEEWKNYDTEIQQLGEDLANEVFKNLVNELALDLVTRTSH* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01250 464 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g01250 464 PANTHER OS04G0572500 PROTEIN 18 458 - -
Lapu3g01250 464 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01250 Lapu-Chr3 13492563 13495518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01250 15 458 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 27.505 4.06e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01250 - - var:108329219 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01250 3 13492563 13495518 Lapu3g01250 3 13492563 13495518 ECH