Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01243 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCATAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCATTTCCAGCGACCTTCCATGAGCACGCAGAGATTGGATTTGCCATGTTCCACCTTCACTCGCAAAGACAGCTCTTCACGGTCGCAGCCCCTCAGGCCAGTGGGGCTTTCAGTGGAGAAACCTATAGAAGCCAAGACCAGCACATGTTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCCATCACAGCAGCAACTCCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTAAAAAGGCTCGCGGAGCACGACGAGTCCTTCACCAACGTAGCCAAGAGGAAAAAGAGCATCACTGAGTGTGACAATTCTGGTGATAACTTTTGGTTTCAGCCTAGTGTTGAGGGTAACACTTTAGGAGGGCTTAACAACACTTCGCTTGCTTTCTCCTCAGAGGAAGAGAGGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTTCCCTTAAACCCCTGGCTGGAGTCATGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCACCATCACAACGACCATCCAACAGAAGGTTCAGTCTCCAACGCTTCTTCAGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCGTCGGAACATGAAGTAGGAAACGGATCAGGGAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGACGATCATCACGGGTTAGAACTCGTTAGCTTGCTTACTGGTTGCGTGGATGCCATTGGATCAAGAAACGTCACAGCTATAAACCAGTTCATCGCAAAACTGGGCGAACTTGCATCTCCAAAGGGAACCCCCATAAGCCGCATATGTGCTTATTTCACAGAAGCCCTGGCCATCAGAGTCACAAGGCTTTGGCCTCATGTTTTTCACATCACCACGAATGCCCGAGACATGGTGGAGGATGATGAAAGCGGAACTGCATTGAGGCTTCTCAACCAGGTGACCCCAATTCCCAAGTTTATCCATTTCACATCAAACGAGATGCTGTTGAGGGCCTTTGAAGGAAAAGACAGGGTTCACATAATAGACTTTGACATCAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGCCTAGCATCGAGAACAAACCCTCCGAGTCACGTGAGAATCACGGGGATAGGAGAGTCGAAGCAAGAGCTAAACGAAACCGGAGACAGACTCGCAGGTTTCGCCGAAGCACTAAACCTGCCCTTCGAGTTCCACCCCGTTGTGGACAGACTCGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCACGAAACGGTGGCCGTGAACTGCGTTTTGCAGCTGCACAAGACCCTTTACGACGGAAGCGGAGGAGCCTTGAGGGACTTCTTGGGGCTTGTCCGGAGCACCAATCCCAGCGTGGTTGTGGTGGCTGAACAAGAAGCAGAACACAACGAGGCAAGGTTGGAAGCAAGGGTGTGCAACTCGTTGAAGTATTACTCAGCAGTGTTTGATTGTATCGACGAGAGCGGGGTGGCGCAAGAGAGTGGTGTGAGGGTGAAGATAGAGGAGATGTACGGTAGGGAGATAAGGAACATGGTGGCATGTGAAGGGAGGGAGAGGTTGGAGAGGCACGAGAGTTTCGGGAAGTGGAGGAGGATGCTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGAGTTTCTGAAAGGGAAATGAGTCAGAGCCAGTTGCTGTTGAAGATGTATGGTTGTGAGGGTTACAGCGTGAAGAAGGTGGAGATGGAAGGAGCCGCAGCGGTTACTCTTAGTTGGCTTGACCAACCTCTGTATACTGTCTCAGCTTGGGTTCCTGTTGATGTTGCGGGTACCTCCTCCTCTTTTTCTCACCCTACTTGA 1941 0.5106 MLAGCSSSTLLSPSHRLRSEAPAQFQACHFQRPSMSTQRLDLPCSTFTRKDSSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAATPLVEESIKDKSLKRLAEHDESFTNVAKRKKSITECDNSGDNFWFQPSVEGNTLGGLNNTSLAFSSEEERVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRPRHHHNDHPTEGSVSNASSESQSLRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVTAINQFIAKLGELASPKGTPISRICAYFTEALAIRVTRLWPHVFHITTNARDMVEDDESGTALRLLNQVTPIPKFIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLVRSTNPSVVVVAEQEAEHNEARLEARVCNSLKYYSAVFDCIDESGVAQESGVRVKIEEMYGREIRNMVACEGRERLERHESFGKWRRMLVEQGGLRCLGVSEREMSQSQLLLKMYGCEGYSVKKVEMEGAAAVTLSWLDQPLYTVSAWVPVDVAGTSSSFSHPT* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01243 646 Pfam GRAS domain family 261 630 IPR005202 -
Lapu3g01243 646 MobiDBLite consensus disorder prediction 198 255 - -
Lapu3g01243 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 215 627 IPR005202 -
Lapu3g01243 646 MobiDBLite consensus disorder prediction 211 236 - -
Lapu3g01243 646 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01243 Lapu-Chr3 13369285 13372608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01243 1 631 GRAS Transcription Factor Family AT1G63100 56.140 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu3g01243 GRAS 5.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01243 - - gmx:100786173 1048.5