Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01240 ATGGGCAAAGCGTCAAAGTGGTTTCGCGGGCTTCTCGGTCTCAAAAAAACAGAGCATAGTACCTCACCGGCGAAGCAATCCAGAGAAAAACGCCGATGGAGCTTCGTTAAATCATACACAGAAAAGGACAACAACAACAACAACAACAACAACAACAACACTGGTGTCACGTGTCAACAACAAGGAAACAACGGCAGCAAGCACGCAATGGCAGTGGCAGCAGCCACTGCTGCGGTGGCGGAAGCGGCGGTAGCTGCCGCCGAAGCAGCCGCCGTTGTTGTCAGACTAACGAGCAGCAGTGGCAGATGCACCGACGCGGGACCCACAAGGATTCGCCAACATTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGAGAGCATTAAAGGGGTTGGTGAAGCTCCAAGCATTAGTGAGAGGTCATATTGAGAGGAAGCGTACAGCGCAGTGGCTGAAAAGAGTTCAAGCACTCTTGCATGCACAGGCACAAGTCTCTACAGGGTTGGCTCTGCATGCCTCACCTTCAAGTGCAAAGTTATCTACCCACCTCCATGGTCCAGAAACACCCGAAAAATTTGAAAGCCCCATCAGTTCTAAGAGCATGAAATATGAGCAATTACCTATACTTAAGAGAAATGGCTCCAAATCCTGTGTCCAGATCAATGGCTATCAAGAGATATGTGGGAGTCGATCGGAGAATCAAGTAACTGAACAACCATGGAACTCAGCAAGATCATTGATAAGAACATATAGTTCCAATGATGAAAGAAATGACAGGGTTCTTGAAGTTGATTCTGGAAAGCCACACTTTACAAGGCGTAGACACCTCTCTTACTCCACAGGTTCTGATCATTATAGTAAGAGTTTGAACAGCACAAAGGAGTCGACATCTCTTCAATCTGGTCAAAGTCCAGGTGGTGAAGTTCAGTCTTACAGTTACAGCTCACAAAAAGTCAACGAGGCTGAGGAGAGTCCATTCTGCACTGCTGACAATAGTCCACAATTCTTATCAGCAACTTCTAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCCTCAAGGAGTGATGGCTCTAGGAGCTATATTCGTGGTTATCCTGACTACCCAAGTTACATGGCATGCACCGAGTCTTCAAAAGCAAAGGTCAGATCCCTGAGCGCCCCAAAACAAAGGCCAAATAGTGAAAGGCCTGGTTCATCTAATAGATATTCACTTAATGGATTTGATATGTCAAGATTGGCCACACAAAGGGCAATGCATGCAAGCTTCACCAACAAGGCATATCCTGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGTGGGGTACAGATACTGA 1362 0.4714 MGKASKWFRGLLGLKKTEHSTSPAKQSREKRRWSFVKSYTEKDNNNNNNNNNNTGVTCQQQGNNGSKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCTDAGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLKRVQALLHAQAQVSTGLALHASPSSAKLSTHLHGPETPEKFESPISSKSMKYEQLPILKRNGSKSCVQINGYQEICGSRSENQVTEQPWNSARSLIRTYSSNDERNDRVLEVDSGKPHFTRRRHLSYSTGSDHYSKSLNSTKESTSLQSGQSPGGEVQSYSYSSQKVNEAEESPFCTADNSPQFLSATSKDDGFKRSPFTPSRSDGSRSYIRGYPDYPSYMACTESSKAKVRSLSAPKQRPNSERPGSSNRYSLNGFDMSRLATQRAMHASFTNKAYPGSGRLDKLGMPVGYRY* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01240 453 MobiDBLite consensus disorder prediction 40 63 - -
Lapu3g01240 453 MobiDBLite consensus disorder prediction 289 366 - -
Lapu3g01240 453 Gene3D - 111 166 - -
Lapu3g01240 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 161 IPR027417 -
Lapu3g01240 453 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Lapu3g01240 453 MobiDBLite consensus disorder prediction 266 288 - -
Lapu3g01240 453 Pfam IQ calmodulin-binding motif 140 154 IPR000048 GO:0005515
Lapu3g01240 453 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Lapu3g01240 453 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Lapu3g01240 453 MobiDBLite consensus disorder prediction 185 205 - -
Lapu3g01240 453 Pfam Protein of unknown function (DUF4005) 340 415 IPR025064 -
Lapu3g01240 453 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Lapu3g01240 453 MobiDBLite consensus disorder prediction 266 370 - -
Lapu3g01240 453 SMART iq_5 135 156 IPR000048 GO:0005515
Lapu3g01240 453 SMART iq_5 112 134 IPR000048 GO:0005515
Lapu3g01240 453 MobiDBLite consensus disorder prediction 388 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01240 Lapu-Chr3 13333253 13337056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01240 1 453 IQD Protein Family AT4G23060 41.509 3.82e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01240 - - gmx:100793587 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01240 3 13333253 13337056 Lapu3g01240 3 13333253 13337056 PCT