Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01232 ATGGCGTCCTTGCAGCATCCCACAGCTTCTCTCCAATCCAAACACGTCCTAATCCCCCGAAACTCCCTCGCCCAGAAACCCACGTTCACCCTCTCCTTCCCCCGCTCTTCCTTCTCCACCCTCAAGCTCAAGCTCGCCGCCGCCGCCACCCGCCGCTCCAGCGGAGCGTCGGGCGCCAGAATGTCGGCCACGGCGGCCTCCAGCTACGCCCAGGCCCTGGCTGACGTGGCGAGCGCCAACAACACGCTGGACGTGACCGCCGCCGACATCGAGAAAATCGACGAGCTGTTCTCGGACCCGCAGGTGTCGGACTTCTTCGCGGACCCCACGCAGGTCGTGGAGAATAAGCAGAAGCTGGTGGACGAGATCGCGGAGTCCTCGGGGTTCCAACCCCACACCAGAAACTTCCTCTACATCCTCGTGGACTCGCAGAGGATCGATCTCATTAACGAGATTGCGAAGGAGTTCGACTTGGTGTATAACAAGTTGACCGACACGGAGCTCGCGGTGGTGACCTCGGTGGTGAAGTTGGAGTCCCAGCACCTGGCGCAAATCGCGAAGCAGGTTCAGAAGCTGACTGGTGCCAAAAACGTGAGGATTAAGACCCTCCTTGACCCTAGTTTGGTGGCGGGTTTCACCGTGAGGTACGGCATTTCTGGCTCCAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGACATTGCTATTCAGCTTGAGTTGAGTGATATCACACTCGCCGTATAA 747 0.5863 MASLQHPTASLQSKHVLIPRNSLAQKPTFTLSFPRSSFSTLKLKLAAAATRRSSGASGARMSATAASSYAQALADVASANNTLDVTAADIEKIDELFSDPQVSDFFADPTQVVENKQKLVDEIAESSGFQPHTRNFLYILVDSQRIDLINEIAKEFDLVYNKLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLLDPSLVAGFTVRYGISGSKLIDMSVRKQLEDIAIQLELSDITLAV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01232 248 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 62 164 IPR026015 -
Lapu3g01232 248 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lapu3g01232 248 Gene3D - 65 157 IPR026015 -
Lapu3g01232 248 Pfam ATP synthase delta (OSCP) subunit 66 239 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PRINTS ATP synthase delta subunit signature 145 159 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PRINTS ATP synthase delta subunit signature 214 232 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PRINTS ATP synthase delta subunit signature 65 84 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PRINTS ATP synthase delta subunit signature 134 145 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 PANTHER ATP SYNTHASE DELTA CHAIN 36 240 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 Hamap ATP synthase subunit delta [atpD]. 61 241 IPR000711 GO:0015986|GO:0046933
Lapu3g01232 248 NCBIfam ATP synthase F1 subunit delta 66 239 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01232 1 247 Primary Pumps ATPases AT4G09650 60.159 2.61e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01232 K02113 - gmx:100819224 353.214