Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01229 ATGGCCACCACCACCACCACCAGTCTTGGCGGCGGCGCCGGCGGAGACGACCGCGTCCTAGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGACAACCGACTCTCCGGCATCTCCGACCTAATAAACGGCGACGATTCTAAATCCTCCGAAGAGGAAGAGCTCGACCGCTTCGAAGCTGCGGAGAAAGTGATTCTCGCAGACGCATCCCTCTCCGACGAGCCTTCGCGCCAATCCACGTCTCTCTTCAACCCTCCGAACAATCCCGCGGAGTACTTCTCCGCGGTTGACGAGATCATCCACTGGATGGAGCAGCTCTCGATCGCGCCGCCATCCTCCGCCGCGGGACGCAACGGGCAGGTCATCGCGGACCGGGCGGAGAATGCGATTCAGCTCGCGATGTCGCGACTGGAGGACGAGCTGCGGCTCGTGCTGATTGGCAACACCATCCCGCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCAGCTCGCACGACGGCGCCATCGACGATACCTTAGAGAGCTTCGGTGAGGTCGGCTCGAGCCGCTTCCACGAGCGAGGCGCGAGCCTCGGCGACGATTTGTTCGTCGATTTAGTGCGTCCCGAAGCGGTTCAGGACCTCAGGGAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTTTGGATGAGTGTTTGGTCATTCTAGGTGTTGAGAGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGCTGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGACTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTATTATGCAGTTGCTGAATTTCGGCGAGGCTATTTCGATTTGTAAGCGCTCGCCGGAGAAGTTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCCATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGGCTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTCGGAATGAAACTTCCAAAAAGCCAGTCATAACTGGGGATGTTCACCCCTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGACTAGTGAGGAGGATCTCTATCGATTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGTCACCCTTGGGACAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTGGAGGAGAAGTCGAGGCTTTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTGAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCATCGAAGATGGCTCTGAAGGAGAGATTCAAAAGTTTCAATGCCTGTTTTGAAGAAATTTATAGGGTGCAGACAGCTTGGAAGGTACCGGATGATCAGCTTCGTGAGGAGCTGCGGATATCTATATCGGAGAAGGTGATTCCTGCATACCGCTCTTTTGTGGGTAGGTTTAGGAGTCAGTTAGAAGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1995 0.5158 MATTTTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQLSIAPPSSAAGRNGQVIADRAENAIQLAMSRLEDELRLVLIGNTIPLDAVSRYGSIRRVSLSFSSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVAVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCIMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLETSEEDLYRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01229 664 Coils Coil 139 159 - -
Lapu3g01229 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 651 IPR004140 GO:0000145|GO:0006887
Lapu3g01229 664 Pfam Exo70 exocyst complex subunit 288 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu3g01229 664 SUPERFAMILY Cullin repeat-like 93 650 IPR016159 -
Lapu3g01229 664 Gene3D Exocyst complex component Exo70 92 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01229 Lapu-Chr3 13209031 13211622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01229 17 663 EXO70 exocyst subunit family AT5G50380 60.029 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01229 K07195 - gmx:100818693 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01229 3 13209031 13211622 Lapu3g01229 3 13209031 13211622 ECH
Lapu9g00921 9 13964307 13969520 Lapu3g01229 3 13209031 13211622 PCT