Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01181 ATGATCTCTTTGGTAGTGTTTTCCTTCCTCACGCTCCTTTTGAACTTTTCATTGATGAAACATTTGAGAAAGGCTTCTGCAGAAAAGAGACGGCTACCTCCAGGGCCAAGGAAACTACCCTTCATTGGCAACCTCCACCAGCTTGGAACGTTGCCCCATCGATCCCTTCAGCACCTTTCACGTAAGCATGGACCTCTCATGTTCTTGCAGTTGGGTTCCATACCCACCTTGGTCGTTTCTTCGGCTGACATGGCTAAAGAGATCTTCAAAAACTATGACTCAGTTTTCTCTGGGAGGCCTCTACTGCACGCTGCAAACCGCCTAGGATACGGTTCAAGCGTGAGTTTCGCGCCGTACGGCGAGTACTGGAGGGAAATGAGGAAAATCATGATCTCAGAGTTACTGAGTCCGAAAAGGGTTCAATCGTTTGAAGCTGTGAGGTTGGACGAGGTCAAACTTCTGCTTCAGGCTGTTTGTCTTTCTCCTTGCCATGTCAACTTGACTGAACTGACGCTTTCGCTGACCAACAGCGTTGTCTGTCGGGTTGCTCTTGGCAAAAGGGACCCGGGTGCAAACGATGCAAACAAGGTTCACAAAATACTTAAAGAAACGCAGGAAATGTTGGGAGGATTCTTTGTGGTTGACTTCTTTCCACGGTTGGGGTGGCTCGACAAGTTCAGTGGCCTTGAAAGCAGACTAGAGAAGAATTTCAGAGACATGGACAGTTTTTATGACCAAGTGATTAAGGAGCACCTTGATCACTCTTCTGAGAAGGCAGGAGCAGAGCATGAAGATGTTGTGGATGTGCTGCTTCACGTTCAGAAGGATCCCAATCAAGCCATTGCCATCAGTGACCACCAAATCAAGGGTGTACTTGTGGACATCTTTGTAGCAGGAACTGATACTGCTTCAGCAACAATGATATGGACAATGTCTGAGTTGATTAGGAACCCGAAAGCAATGAAAAGAGCACAAGAAGAAGTAAGAGAAATGATCAAGGGAAAGGAAATGGTAGAAGAGATTGACCTCTCAAAGCTCTTGTACCTCAAGTCAGTTGTGAAGGAGGCACTGAGACTCCATCCACCTGCACCATTGCTCGTGCCAAGAGAGACTACAGAGGCTTCATGA 1128 0.4707 MISLVVFSFLTLLLNFSLMKHLRKASAEKRRLPPGPRKLPFIGNLHQLGTLPHRSLQHLSRKHGPLMFLQLGSIPTLVVSSADMAKEIFKNYDSVFSGRPLLHAANRLGYGSSVSFAPYGEYWREMRKIMISELLSPKRVQSFEAVRLDEVKLLLQAVCLSPCHVNLTELTLSLTNSVVCRVALGKRDPGANDANKVHKILKETQEMLGGFFVVDFFPRLGWLDKFSGLESRLEKNFRDMDSFYDQVIKEHLDHSSEKAGAEHEDVVDVLLHVQKDPNQAIAISDHQIKGVLVDIFVAGTDTASATMIWTMSELIRNPKAMKRAQEEVREMIKGKEMVEEIDLSKLLYLKSVVKEALRLHPPAPLLVPRETTEAS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01181 375 Pfam Cytochrome P450 33 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 SUPERFAMILY Cytochrome P450 30 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 373 - -
Lapu3g01181 375 Gene3D Cytochrome P450 22 374 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01181 375 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01181 Lapu-Chr3 12739356 12743057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01181 23 373 Cytochrome P450 AT3G48270 43.626 4.83e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01181 K20617 - gmx:100806157 578.556