Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01178 ATGCCATGTAACATGTATGGTTATAAATGTAGTCTGACAAGGCTAGATGTGGTCGAACAAAAAGAAATGGCTCTCAAACAATGGCCTTATGAGCAAATGGAAGGAGTGTTATCTTCTTCTACCTTCTATCTCTCTCTTTCCTTTTTCATCAGTGTTCTGTTATTGTTTAAGCTTGCAAGAAGGTCAAAATCCAAATCCAAAACCAATCTGAATCTGCCTCCTTCTCCACCAAAGCTACCATTAATCGGCAATCTGCATCAGTTTGGCACGCTGCCACATCGATCTCTTCGAGATCTCTCTCTCAAATATGGTGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTTGTGGTTTCATCTGTAGATGTGGTCACGGAAATAATCAAAACTCATGACCTAGCCTTTTCGGACAGACCCCAAAACACTGCTACAAAAATCTTACTCTATGGATGCACAGATATTGGCTTCTCACTCTATGGAGAAAGCTGGAGACAGAAAAGAAAAATATGCGTGCTTGAACTTCTAAGCACCAAAAGGGTGCAATCATTTCGAGTCATAAGGGAAGAAGAAGTTGCGGAGTTGGTGAACAAGCTACGTGAAGCAAGCTCGAGCGATGCCAGTTACGTGAATCTAAGTGAGATGATTATGTCAACATCAAATAATATTGTGTGTAAATGTGCTCTTGGAAGGAAGTTTGCAGGAGATGGTCACGGCAGAGTGAAAAAGTTAGCAAGGGAAACCATGATTCACATCACAGCTTTCACAGTGAGAGATTACTTCCCTTGGTGTGGTTGGGTTGATGTTGTCACTGGAAAAATTCAGAAATACAAGGCCACTGCTGGAGCAATGGATACTTTATTTGAGGAGGCAATTGAAGAGCGTTTGAGGGCGAGAAGAGAAGGTCAACACTCCAAAATGAAAGACTTCTTGGATATCCTCCTCCAACTTCAGGAGGATAACACGCTGGGCTTTGACTTCACCAGAAATGACATCAAAGCACTTATTACGGACATGTTTCTGGGAGGTACCGACACTACTGCAGCCACATTAGAATGGACCATGTCAGAACTTATGAGAAACCCGACCACAATGAAAAAAGTGCAAGAAGAAGTGAGGAGAATTGTAGGTCATAAGTCAAAAGTGGAAGAGAATGATGTGAATGAAATGCGCTATCTAAAATGTGTAGTAAGAGAAATTATAAGGTTACACCCTCCAACTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTGAAAGGATATGATATTCCAGCAAAAACAACCGTATATATTAATGCATGGGCAATGCAAATGGATCCTAAATTTTGGGAACGTCCTGAAGAGTTTCTGCCAGAGAGATTTGAAAATAGTGAAGTTGATTTTAAAAACCAAGAAAACTTTCAGTTTATTCCATTTGGCTTCGGAAGAAGAGGATGTCCTGGAATGAATTTTGGAGTTACTTCAGTTGAGTATGTGCTTGCTAATCTTCTTTGTTGGTTCGATTGGAAGTTGCCTCAAAATGGTGCACCAGATATAGATATGAGTGAGATATTTGGACTTGTTGTCTCCAAGAAAGTTCCACTTCTCCTTAAACCAAAAGCCTTTTCATCTTAA 1629 0.4052 MPCNMYGYKCSLTRLDVVEQKEMALKQWPYEQMEGVLSSSTFYLSLSFFISVLLLFKLARRSKSKSKTNLNLPPSPPKLPLIGNLHQFGTLPHRSLRDLSLKYGDIMMLQLGQMQTPTLVVSSVDVVTEIIKTHDLAFSDRPQNTATKILLYGCTDIGFSLYGESWRQKRKICVLELLSTKRVQSFRVIREEEVAELVNKLREASSSDASYVNLSEMIMSTSNNIVCKCALGRKFAGDGHGRVKKLARETMIHITAFTVRDYFPWCGWVDVVTGKIQKYKATAGAMDTLFEEAIEERLRARREGQHSKMKDFLDILLQLQEDNTLGFDFTRNDIKALITDMFLGGTDTTAATLEWTMSELMRNPTTMKKVQEEVRRIVGHKSKVEENDVNEMRYLKCVVREIIRLHPPTPLLAPRVTMSDVKLKGYDIPAKTTVYINAWAMQMDPKFWERPEEFLPERFENSEVDFKNQENFQFIPFGFGRRGCPGMNFGVTSVEYVLANLLCWFDWKLPQNGAPDIDMSEIFGLVVSKKVPLLLKPKAFSS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01178 542 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 Pfam Cytochrome P450 73 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 SUPERFAMILY Cytochrome P450 73 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 CDD CYP71-like 102 533 - -
Lapu3g01178 542 Gene3D Cytochrome P450 62 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01178 542 PANTHER CYTOCHROME P450 71B11-RELATED 54 537 - -
Lapu3g01178 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Lapu3g01178 542 FunFam Cytochrome P450 83B1 59 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01178 Lapu-Chr3 12703344 12706131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01178 58 537 Cytochrome P450 AT3G26320 44.444 3.71e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01178 K20617 - gmx:100803922 826.624