Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01176 ATGGCTCTCAAACAGTGGCCTTATGAGCAAATGAAAGGAGTGTTCTCTTCCACCATCTATCTCTCTCTTTCCTTCTTTATTAGTGTCCTAATATTGCTTAAACTGATCACAAGAAAAAACAGATCCAAAACCAACTTGAATCTGCCTCCATCACCACCAAAATTGCCAATCATAGGCAATCTTCATCAGTTAGGCACACTGCCACATCGATCTTTTCGAAACCTATCCCTTAAGTACGGTGACATGATGATGTTGCAGTTGGGGCAGAGAGAAACTCCAACTCTGGTGATTTCATCTGCAGAAGTGGCCATGGAAATGACGAAAACTCATGACCTAGCTTTTTCCAACCGACCACAAAACACTGCTGTGAAAACCTTGTTGTATGGAGCCCGAGACGTTGGGTTTCAAGTCTACGGAGAAGACTGGAGGCAGAAAAGAAAAATATGCGTGCTCCAATTTTTGAGCATGAAAATGGTGCGATCGTTTAGTTTGATCAGAAGAGAAGAAGTTGCAGAGATGGTGGACAAGTTACGTGAAGCAAGCTGCAGTGATGCACCTTACATGAATCTGAGTGAGATGCTTACGTCAACCTCGATGAATATGGTATATAAGTGCGCTTTCGGACGGAAGTATTCGGGAGATAGTGACGGAAGGGTGAAAAGGTCGGTGAGGAATCTTATGATTCAAGTCGCAGCTTTCACTGTGAGGGATTACTTTCCTAAATTGGGTTTTATTGATGTTCTCACCGGAAAAATTGGAGAGTTGAAGGCCACTTTCGAAGCGTTAGATGCTGTTTTTGATCAAGCAATTGAAGAACATTTGACGGCGAAAACGCACTTCCAAAAGAAAAACTTCCTGGATATTCTCCTCCAACTTAAAGAGGATAGCACGCGGAACTTTGAGCTCACCACAAATGATGTCAAAGCACTTCTAATGGACATGTTTGTTGGAGCAACCGACACAACTTCAGTTACAATAGAGTGGACTATTTCAGAACTTGTGAGAAATCCAGCCATAATGAAGAAAGCACAAGAAGAAGTGAGAAAGGTTGTGGGACATAAATCTGTGGTAGAAGAAAATGACATCAGTGGAATGCAGTACCTAAAGTGTGTAATTAAAGAAATTCTGAGGTTACATCCACCTGCTCCTCTGTTGGCTCCTCGAGAAACAATATCTAGCGTGAAGCTGAATGGATACGATATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATTCAGAGAGATCCAAAAATTTGGGAAAACCCTGAAGAGTTTGTACCAGAGAGGTTTGAAGGCAATGAAGTTGGTTTTAAATGTCATGATTTTGAGTTTATTCCATTTGGCATGGGAAGAAGAGGATGTCCTGGAATAGATTTTGGACTTGCTTCTCTTGAGTATGTGTTGGCCAATCTTCTCTACTGGTTCGACTGGAAACTTCCTAAAACTGAGACATTAGATATGAGTGAGATATTTGGACTCGTGGTCTCAAGAAAACTACCACTTAATGTTAAACCGATAATATATACTTTCTAA 1539 0.4107 MALKQWPYEQMKGVFSSTIYLSLSFFISVLILLKLITRKNRSKTNLNLPPSPPKLPIIGNLHQLGTLPHRSFRNLSLKYGDMMMLQLGQRETPTLVISSAEVAMEMTKTHDLAFSNRPQNTAVKTLLYGARDVGFQVYGEDWRQKRKICVLQFLSMKMVRSFSLIRREEVAEMVDKLREASCSDAPYMNLSEMLTSTSMNMVYKCAFGRKYSGDSDGRVKRSVRNLMIQVAAFTVRDYFPKLGFIDVLTGKIGELKATFEALDAVFDQAIEEHLTAKTHFQKKNFLDILLQLKEDSTRNFELTTNDVKALLMDMFVGATDTTSVTIEWTISELVRNPAIMKKAQEEVRKVVGHKSVVEENDISGMQYLKCVIKEILRLHPPAPLLAPRETISSVKLNGYDIPAKTMVYINAWAIQRDPKIWENPEEFVPERFEGNEVGFKCHDFEFIPFGMGRRGCPGIDFGLASLEYVLANLLYWFDWKLPKTETLDMSEIFGLVVSRKLPLNVKPIIYTF* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01176 512 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 CDD CYP71-like 78 503 - -
Lapu3g01176 512 PANTHER CYTOCHROME P450 71B11-RELATED 32 507 - -
Lapu3g01176 512 Gene3D Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 FunFam Cytochrome P450 83B1 35 506 - -
Lapu3g01176 512 SUPERFAMILY Cytochrome P450 49 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 Pfam Cytochrome P450 49 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01176 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01176 Lapu-Chr3 12679301 12682574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01176 44 507 Cytochrome P450 AT2G30770 44.468 1.86e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01176 K20617 - gmx:100803922 691.804