Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01175 ATGAAGTGCAGAGGCTTGGCAGGAGGTGGCCATCCTGCACTGACACACGGAAAGGAGAAGGAGACTAAGAGGAAGGAAGAGACGTTATGGACCATTGATCTTAAACAAGTAGAGATTGCATTTTTGAAGGTTTTGTCCATCATCATGGAAACACACGGATTGGATATGTTCGTTGGAGGAACTGATCCGGCTGCAGTAACATTAGACTGGGTTATTTCAGAGCTTGTGAGAAATCCGAACTGCACAGTCAAAGAAACTCTGAGGTTGCATCCACCTGCTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTGAAAGGATATGATATTCCTGCAGAATCAATGGTATGCATTAATGCATGGGCGATTCAGAGGGATCCTTCATTTTGGGAAAGTCCTCAAGAATTTCTACCAGAGAGATTTGAAAATAGTGAGCTTGACTTTAAAGGTCATAATTTTCAGTTTATTCCATTTGGTTTTGGGAGAAGAAGATGTCCTGGAATGCATTTTGGAATTGCTTCTGTTGAGTATGTTCTTGCCAATCTTCTTTATTGGTTCGATTGGAAGTTGTCTGAATCTGATGCACTTAAACAAGACATTGATATGAGTGAGATGTCTGGACTCGTTGTCTCAAAGAAAACACCACTTTATCTTAAACCAATAGCTTATTCATTTCCATCCAAGTCCTAA 696 0.4066 MKCRGLAGGGHPALTHGKEKETKRKEETLWTIDLKQVEIAFLKVLSIIMETHGLDMFVGGTDPAAVTLDWVISELVRNPNCTVKETLRLHPPAPLLAPRVTMSDVKLKGYDIPAESMVCINAWAIQRDPSFWESPQEFLPERFENSELDFKGHNFQFIPFGFGRRRCPGMHFGIASVEYVLANLLYWFDWKLSESDALKQDIDMSEMSGLVVSKKTPLYLKPIAYSFPSKS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01175 231 Gene3D Cytochrome P450 16 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 160 169 IPR017972 GO:0005506|GO:0016705
Lapu3g01175 231 Pfam Cytochrome P450 82 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 MobiDBLite consensus disorder prediction 1 22 - -
Lapu3g01175 231 PANTHER CYTOCHROME P450 71B11-RELATED 50 81 - -
Lapu3g01175 231 PRINTS E-class P450 group I signature 80 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS E-class P450 group I signature 167 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS E-class P450 group I signature 157 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS E-class P450 group I signature 121 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS P450 superfamily signature 81 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 PRINTS P450 superfamily signature 158 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01175 231 SUPERFAMILY Cytochrome P450 52 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01175 Lapu-Chr3 12662637 12667956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01175 55 225 Cytochrome P450 AT3G26270 43.350 1.63e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01175 K20617 - gmx:100803384 268.47