Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01174 ATGTACCAGCAACTGAAAAAAAAAATGTTATTCTCTAACTTTTATCTATATCTTCTCTTCTGTATCGGCCTCCTTTATGTGTTTAAGCTCGCAAGAAAAACCAAATCCAAAACCAAACTGAATTTGCCTCCATCACCACCAAAACTACCATTCATTGGCAATCTTCATCAATTTGGCACACTGCCACACCGCTCTCTTCGAGACCTTTCACTCAAATATGGTGACATCATGTTATTGCAGTTGGGGCAGATGCAGAATCCAACTCTGGTGGTTTCATCTGTCGAGGTGGTCACGGAAATCGTGAAAACGCTTGACATGGCCTTTTCCAACCGGCCTCAGAACACTGCTGCAAAAATCTTACTCTATGGATGTACTAACATTGCCTTTTCACACTATGGAGAAAACTGGAGACACAAAAGGAAAATAGGTGTCCTTGAACTTCTGAACATGAAAACGGTTCAATCACTTCATGAAATCAGAGAAGAAGAAGTTGCCAAATTGGTGAATGAGCTGCGTGATGTGAGCTCCTGTGATGAGTGCTATGTAAATCTAAGCGAAATGCTTATGTCAACATCCATCAACTTCGTGTGTAATTGTTCTCTTGGACGAAAATACACCAGCGATGGTTACAGCAAAGTGAAAGAGTTAGCGAGGGATGTCATGGTTCAGCTTACAGCTTTCACTGTGGGAGATTACTTCCCTTTGCTGGGTTGGGTTGATTTTCTGACCGGAAAAATTCAGGAATATAAGGCCACTTTTCATGCTTTGGATGCTTTATTTGACCAAACAATTGAGGAGCACTTGACGGAGAATATGGAAGGTGACCACTCCAAAAACAAAGCCTTTGTGGATGTCCTGCTCCAACTTCAACAGAGTAACAAACTTAACTTTGACATCACCAAAAATGACCTCAAATCACTTCTCCTGGATATGTTCGCCGGAGGAAGTGACACAGGTTCAGTAGCAGCAGAATGGGTTTTTTCAGAGCTTGTGAGAAACCCAGCCATAATGAAGAAAGTACAAGAAGAAGTGAGAAAAATCGTAGGACATAAATCAAATATAGAAGAAAGTGACATCAGTCAAATGCATTACCTGAAATGTGTTATTAAAGAAACTCTAAGGTTGCATCCACCTGCTACACTTTTGGCTCCAAGGGAAACAATATCTAGTGTTAAATTGAAAGGATACGACATTCCAGCAAAAACAGTGGTACATGTTAATGCATGGGCAATTCATAGGGATCCTAGATTTTGGGAAAGTCCCGAAGAATTCATTCCAGAGAGATTTGAAAACAGTGAAATTGATTATAGAAGTCAACATTTTCAATATATTCCATTTGGTATTGGGAGAAGAGTATGTCCGGGAATAAATTTTGGACTTGTTTTTGTTGAGTATGTTGTCGCCAACCTTCTTTATTGGTTCGATTGGGAGTTACCTGAGTCTGATAAGCTTAAACAAGATATAGATATGAGTGAGACGTTCGGGCTTGTTGTCTCTAGGAACACACCACTTTATCTTAAACCAGTAATTTTTCCATCTTTCTAA 1545 0.3981 MYQQLKKKMLFSNFYLYLLFCIGLLYVFKLARKTKSKTKLNLPPSPPKLPFIGNLHQFGTLPHRSLRDLSLKYGDIMLLQLGQMQNPTLVVSSVEVVTEIVKTLDMAFSNRPQNTAAKILLYGCTNIAFSHYGENWRHKRKIGVLELLNMKTVQSLHEIREEEVAKLVNELRDVSSCDECYVNLSEMLMSTSINFVCNCSLGRKYTSDGYSKVKELARDVMVQLTAFTVGDYFPLLGWVDFLTGKIQEYKATFHALDALFDQTIEEHLTENMEGDHSKNKAFVDVLLQLQQSNKLNFDITKNDLKSLLLDMFAGGSDTGSVAAEWVFSELVRNPAIMKKVQEEVRKIVGHKSNIEESDISQMHYLKCVIKETLRLHPPATLLAPRETISSVKLKGYDIPAKTVVHVNAWAIHRDPRFWESPEEFIPERFENSEIDYRSQHFQYIPFGIGRRVCPGINFGLVFVEYVVANLLYWFDWELPESDKLKQDIDMSETFGLVVSRNTPLYLKPVIFPSF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01174 514 Pfam Cytochrome P450 43 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 SUPERFAMILY Cytochrome P450 43 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PANTHER CYTOCHROME P450 71B11-RELATED 26 508 - -
Lapu3g01174 514 CDD CYP71-like 72 504 - -
Lapu3g01174 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Lapu3g01174 514 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 FunFam Cytochrome P450 83B1 30 507 - -
Lapu3g01174 514 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01174 514 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01174 Lapu-Chr3 12656265 12658732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01174 43 508 Cytochrome P450 AT3G26330 44.304 3.40e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01174 K20617 - gmx:100803384 756.133