Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01173 ATGGCTCTCGAATCAAATCCACAACCATGTTGCCAAAATTCAACGTTCTACTTCTCCTTCCTTTGCATCTTCATCAGCATCGCGTTCGTCGTGTTTAAACTCTCCAGAAGAACCAAAACCAATTCACCTCCATCCCCACCCAAGATACCCTTCATCGGAAATCTTCATCAGCTTGGCACGTTGCCGCACCGCTCCTTCCAAGCCCTCTCTCACAAGCATGGCCCTCTCATGTTGCTCCAGCTGGGGCAGGTCCCAACACTCGTCGTTTCATCCGCAGACGTGGCCGGAGAAATATTCAAAACTCACGACCTCGTTTTCATGAACCGGCCAAAAGCCACCGCCGCCGGAATCTTTCTCTACGGCTACAAGGACGTGGCTTTCACCCCCTACGGCGAAGAGTGGAGACAGAAGAGGAAGGTGTGCGTTCTTGAGCTTGTGAGCTTGAAAAGCGTGCGGTCGCTGCAATTCATCCGCTTTGAAGAAGTCGCAGCAATGTTGGGTGCGATACGCGAAGCGTGTGCGAGGGAAACAGCCTCTGTGAACCTGAGTGAGTTGTTGATTGCACTCACCAACAACATAATGTCAAGGTGTGTTCTTGGACAAAAGTACGATACTCCCGATGGTAGTAACAGCTTCGGGGAGCTTGGAAGGAAGTTGCTGACTCAGTTCACAGCTTTCTGCGTGGGAGATTTCTTCCCTTCGTTGGGTTGGGTTGACGTTCTAACGGGCCAAATTTCCAAGTTTAAGGCCACTCTGAGTTCGATAGATAGTTTCTTTGATCAGGTAATTGCAGAACATAAAGAAAAGATGAAGAAGAGGGATAGTATCGAATCCGAAAAGAAAGACTTTCTGGATATCCTTCTTCAACTTCAAGAGACCGATTTGCTTGGTTTCCATCTCTCCCAAGATATTCTCAAAGCAATGCTAGTGGACATGTTTATAGGGGCAAGTGACACAACTTCAACGACTTTGGAATGGACTATGGCGGAGCTCATGAGGAATCCAAATACCATGGAAAAGGCTCAGGAAGAAGTAAGAAGAGTGGTCCGAGATAAAGCTGAGGTAGATGAAAATGATGTGAAACAAATGAGTTACTTGAATTGTGTGGTGAAAGAAACTTTGAGGTTGCATCCACCTGCACCTCTTTTGCTTCCTAGAGAAACAACCTCTTCTGTGAAACTAAGAGGGTACGATATTCCAGCCAAGACAAGGGTACTGTTGAACGCGTGGGCCATACAGAGGGACCCTGAACTTTGGGACAGACCAGATGAGTTCCTTCCAGATAGATTTGAAAACAGCCAGGTAAATTTCAAAGGACAAGATTTGGAGTTTATTCCATTTGGTGGTGGAAGAAGGGGATGCCCAGGAATTACATTTGGGATCACTGTAGCTGAGTATGCACTTGCTAATCTTCTTTATTGGTTCGATTGGAAGCTGCCTAAAACTGATGCAGCAGCTCAAGGTATTGACATGAACGAGAAATATGGAATCGCTGTGAACAAGAAGGTTCCACTTCTCCTTCAACCAATACCCTTCTCCTAA 1542 0.465 MALESNPQPCCQNSTFYFSFLCIFISIAFVVFKLSRRTKTNSPPSPPKIPFIGNLHQLGTLPHRSFQALSHKHGPLMLLQLGQVPTLVVSSADVAGEIFKTHDLVFMNRPKATAAGIFLYGYKDVAFTPYGEEWRQKRKVCVLELVSLKSVRSLQFIRFEEVAAMLGAIREACARETASVNLSELLIALTNNIMSRCVLGQKYDTPDGSNSFGELGRKLLTQFTAFCVGDFFPSLGWVDVLTGQISKFKATLSSIDSFFDQVIAEHKEKMKKRDSIESEKKDFLDILLQLQETDLLGFHLSQDILKAMLVDMFIGASDTTSTTLEWTMAELMRNPNTMEKAQEEVRRVVRDKAEVDENDVKQMSYLNCVVKETLRLHPPAPLLLPRETTSSVKLRGYDIPAKTRVLLNAWAIQRDPELWDRPDEFLPDRFENSQVNFKGQDLEFIPFGGGRRGCPGITFGITVAEYALANLLYWFDWKLPKTDAAAQGIDMNEKYGIAVNKKVPLLLQPIPFS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01173 513 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Lapu3g01173 513 FunFam Cytochrome P450 83B1 30 508 - -
Lapu3g01173 513 Pfam Cytochrome P450 43 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 Gene3D Cytochrome P450 29 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 Coils Coil 338 358 - -
Lapu3g01173 513 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 SUPERFAMILY Cytochrome P450 43 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g01173 513 CDD CYP71-like 72 505 - -
Lapu3g01173 513 PANTHER CYTOCHROME P450 71B11-RELATED 28 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01173 Lapu-Chr3 12650923 12652656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01173 33 505 Cytochrome P450 AT3G48270 44.000 1.69e-147 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01173 K20617 - vra:106753291 627.861