Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01160 GACTCAGCCATGGGATCTGAACTCCTACATAATTATAGCAAAACTGATACTATGAAGTTCCTCTGCAGCTACGGCGGAAAGATCCTTCCTCGCCGCACCGACGGTATCCTCCGATACTACGGCGGCCACACCAGAGTCCTCGCTCTCCACCCTTCCACTTCATTCTCAGAGTTGATGATACAGATTAACGAGCTGTGTGGTTCTCCGGTGACACTCCGGTGTCCATTGCCAAACGGAGACTTGGACACCTTGATTTCCATAAAAAACGACGAAGATTTGGTGAATATAGTCGAGGAATACGATCGAGCTTCTTCGTCCCTGCCTCATCGGTTGAAGATCAGAGCCATTCTTTCGTCGGTAAACAAATCCTCTCCTCCGTCTTCTTCATCCAGCGCCTCTCACACTCCGCACGGGTCGCCTCACTCCTCCGGCAGTTTCCCGCCGTGTTCTGAGGCGCACCAGCTCGGCTGTCGGAATTGCTCGCCGATTGCGTATTCTATTGGGGTCCGTAACGAAGCGGCAAAATCCGGTTCGTCTCACTCCTCCCCCGGTCCCCCGCAGTGCTGCGCGGACCGCTTCGGTTGCCGGAATTGTTCCTTAGCTGCGTATCTTATTAGTGTCCGTAATGGAGCGGCGAAATCCCGTTCCCCTCACTCCTCCGGTGGCTCCCCACCGTACTCCGCGATTCACCGTTTCGGCTGCCAGAATTGCTCGCTGGTTCCGTATCCTATTTGCGTCTGTAACGCAGCGGCAAAAGGATGTTAG 765 0.5438 DSAMGSELLHNYSKTDTMKFLCSYGGKILPRRTDGILRYYGGHTRVLALHPSTSFSELMIQINELCGSPVTLRCPLPNGDLDTLISIKNDEDLVNIVEEYDRASSSLPHRLKIRAILSSVNKSSPPSSSSSASHTPHGSPHSSGSFPPCSEAHQLGCRNCSPIAYSIGVRNEAAKSGSSHSSPGPPQCCADRFGCRNCSLAAYLISVRNGAAKSRSPHSSGGSPPYSAIHRFGCQNCSLVPYPICVCNAAAKGC* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01160 254 MobiDBLite consensus disorder prediction 122 147 - -
Lapu3g01160 254 CDD PB1_UP2 21 117 - -
Lapu3g01160 254 Pfam PB1 domain 37 111 IPR000270 GO:0005515
Lapu3g01160 254 PANTHER OS05G0427100 PROTEIN-RELATED 16 183 - -
Lapu3g01160 254 SUPERFAMILY CAD & PB1 domains 34 122 - -
Lapu3g01160 254 SMART PB1_new 32 118 IPR000270 GO:0005515
Lapu3g01160 254 Gene3D - 37 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01160 Lapu-Chr3 12539800 12540958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01160 14 102 MAP Kinase Kinase Kinase AT3G46920 41.573 1.56e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01160 - - vun:114177582 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01160 3 12539800 12540958 Lapu3g01160 3 12539800 12540958 ECH