LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu3g01159	ATGTCTCCGTCCAAAATCTCCGTCGCCGGTGAGATTTCACTTTCCGGCAAGTGGTTTCTTATTCTTCTCCACCTCTCTCTGTTCGTGGCTCCTTCTCTTTCATTGGACTTCCTATTCAACTCCTTCACCGGCATCACCAACCTCACTTTCGTCAAAGACGCTCGCGTCGACTCCTCGGTGATTCGCATGACCAACGACTCCAACCAGTACTCTTATGGGCGTGCCTTCTATCCAACAAAAGTTCCCATGAGAAAAACCTCTTCCAATTCCTCATCCTCATCCATTACTTCATTCTCCACCTCTTTCGTATTCTCCGTCTTGCCGCAAATCCCTACCAGTCCTGGCTTTGGCCTCGCCTTCGTCCTCTGCAACACCACCGATCCTCCCGGAGCCCTCGCCAGCCAGTACTTCGGCCTATTCACCAACGCCACCTCCCCCACCTTTTTCCCCCTTGTCGCCGTCGAGTTCGACACCGGCCAGAACCCTGAGTTCAACGACATCGACGATAACCACATCGGCATCGACCTCAACAACATCGAATCCACCAACGCCACCCCCGCCGGCTACTACAATTCCACCGGGGGCTTCGTGCCGGTGCGCATGCGCACCGGTCAGAACATCCGGGCCTGGATTGATTTCGACGGCCAGAATCTGCTATTCAACGTAACCGTCGCGCCAATCGGCGTTTCGCGCCCGTTGAAACCTACACTTTCGCATTATATTCCCACCATAGGTAACTACGTGTCAGCTGACATGTACGTCGGGTTTTCCGCTTCCAAAACGAACTGGATCGAGGCGCAGAGGGTTCTGGCGTGGAGCTTCAGCGATACAGGGCCAGCGAGGGAGCTGAACACAACAAACTTACCGGTGTTCGAACCGGAATCGTCGTCTTCCTCGCTTTCTGGTGGCGCAATAGCGGGGATTGTTGTTGGTTGTGTTGTTTTCGTGGTTGTATGCGGCTGTGGTCTTTACTTATGGTGGCGAATCCATAGCGGGAAAGACGAAGAGGAGGAGATCGAAGATTGGGAGTTAGAGTACTGGCCGCATAGATTCTCGTACGAGGAATTGAGTACAGCGACAGGGGAATTTGGGAAGGAGAAGCTGTTAGGTTCGGGAGGGTTCGGGAGGGTGTACAGAGGGACGCTGCCGAACAAGACGCAGATTGCGGTTAAGTGCGTGAACCACGATTCGAAGCAAGGGTTGCGAGAATTCATGGCGGAGATAGCGAGTATGGGGAGGCTTCAACACAAGAACTTGGTTCAAATGCGAGGGTGGTGTAGAAAGGGGAACGAGCTTATGCTTGTTTATGATTACATGCCTAATGGGAGTCTGAACAGGTGGGTTTTCGATCGCCCCGAGAAGCTTCTAGGGTGGGAGCAACGCCGCCGTATCCTTGTCGACGTGGCAGAGGGACTTAACTATCTTCACCACGGTTGGGACCAGGTTGTTATCCATCGAGATATTAAGTCTAGTAACATATTGTTGGACGCCGACATGCGAGGGAGACTCGGGGACTTTGGTTTGGCCAAGCTCTACACGCACGGGGAGGTTCCCAACACCACGCGTGTGGTGGGCACGTTGGGCTACTTGGCACCGGAGCTGGCCACGGTTGCGGCGCCAACGTCGGCGAGTGATGTCTACAGCTTTGGGGTGGTGCTGTTGGAGGTGGCCTGCGGAAGGCGGCCCATTGAGACTTCGGTGGCGGAGGAGGAGGTGGTGCTCATTGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCCCGTGAGGCTGCCGATGCAAGGATCGGAGGGGAGTACGATGAGGGAGAAATGGAAATGGTTTTGAAGCTTGGGTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGGCCCACCATGAAGGAAGTCGTCGCGCTTCTCCTCGGAGAGAACCCACCGGAGGCGCCCGGCAAAGTGTTGTCCGATTTGGTTCGTGGCGGCGATGACTTCGATGAGGCGGCGCCTTTGCAACCCTCCTCCACGCGGGTTTAG	2007	0.5536	MSPSKISVAGEISLSGKWFLILLHLSLFVAPSLSLDFLFNSFTGITNLTFVKDARVDSSVIRMTNDSNQYSYGRAFYPTKVPMRKTSSNSSSSSITSFSTSFVFSVLPQIPTSPGFGLAFVLCNTTDPPGALASQYFGLFTNATSPTFFPLVAVEFDTGQNPEFNDIDDNHIGIDLNNIESTNATPAGYYNSTGGFVPVRMRTGQNIRAWIDFDGQNLLFNVTVAPIGVSRPLKPTLSHYIPTIGNYVSADMYVGFSASKTNWIEAQRVLAWSFSDTGPARELNTTNLPVFEPESSSSSLSGGAIAGIVVGCVVFVVVCGCGLYLWWRIHSGKDEEEEIEDWELEYWPHRFSYEELSTATGEFGKEKLLGSGGFGRVYRGTLPNKTQIAVKCVNHDSKQGLREFMAEIASMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWVFDRPEKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVAEEEVVLIDWVRELYAKGCAREAADARIGGEYDEGEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGENPPEAPGKVLSDLVRGGDDFDEAAPLQPSSTRV*	669

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu3g01159	668	ProSitePatterns	Legume lectins beta-chain signature.	152	158	IPR019825	-
	Lapu3g01159	668	CDD	lectin_legume_LecRK_Arcelin_ConA	35	278	IPR001220	GO:0030246
	Lapu3g01159	668	FunFam	L-type lectin-domain containing receptor kinase S.4	33	282	-	-
	Lapu3g01159	668	Pfam	Protein kinase domain	365	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g01159	668	Gene3D	Phosphorylase Kinase; domain 1	348	438	-	-
	Lapu3g01159	668	SMART	serkin_6	363	632	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g01159	668	Gene3D	-	33	292	-	-
	Lapu3g01159	668	ProSiteProfiles	Protein kinase domain profile.	363	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu3g01159	668	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	483	495	IPR008271	GO:0004672\|GO:0006468
	Lapu3g01159	668	SUPERFAMILY	Protein kinase-like (PK-like)	339	632	IPR011009	-
	Lapu3g01159	668	ProSitePatterns	Protein kinases ATP-binding region signature.	369	391	IPR017441	GO:0005524
	Lapu3g01159	668	CDD	STKc_IRAK	369	632	-	-
	Lapu3g01159	668	PANTHER	-	52	636	-	-
	Lapu3g01159	668	FunFam	L-type lectin-domain containing receptor kinase S.4	439	643	-	-
	Lapu3g01159	668	FunFam	L-type lectin-domain containing receptor kinase S.1	348	438	-	-
	Lapu3g01159	668	SUPERFAMILY	Concanavalin A-like lectins/glucanases	34	291	IPR013320	-
	Lapu3g01159	668	Pfam	Legume lectin domain	35	288	IPR001220	GO:0030246
	Lapu3g01159	668	Gene3D	Transferase(Phosphotransferase) domain 1	439	640	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu3g01159	Lapu-Chr3	12527127	12529254	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu3g01159	32	634	Receptor kinase-like Gene Family	AT1G15530	68.092	0.0	807

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu3g01159		Pkinase	1.1e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu3g01159	-		-	gmx:100780660	1131.7