Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01157 ATGGAAGATGCGAATCACACCCCAAGAGAAGCAAAGGATTACTATTCTAGATCAATATGGTTGTCAGAAACTGCGCAGGCATTTGGGGATCTCAAGAGAGGTGACAGAAATGGAGTTAATGGCTTCCATTTTACTGCTGGTAGAGATTCCTGCGACTATAACTCCCAAGAAATAGTGACTCCTGAAATTTCTGGAGCATTTGAAGAAATCAAAAGTTTAATTAGTACCAGAAACGGGGTTAATGATGAGGTTGTTGGCCAAGAAAATGGTGACTATGGCCGCTATTCTATACAAACGTTGTCAACAGAAATTGTGGAAATAGTCGAGGATGGCAACAGCATAACAAAAAACAAAGATAGAAGGGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACTTGGATGCAGTGAAATGGGCTCTTGATCACGCTGTTTCTCCCGGTTCCCGAATTTTTCTTATCCACGTCTCTTCTCCAATCACATCGATTCCTACTCCAGTTGGAAGGTTTGAAAGAAGTAAACTGACCCCCCAACAAGTGAGACTATACGTGAATGAAGTGAACAACAAGAGGAAGGATCTTTTGCAGAAGTACATTAAGATGAGTAATGAAGCCAATGTAATAGCGGAAACGTTGCTTCTGGAGAGCAATGACACAGGAAAAGCAATTCTGGATCTCATCTCTATACTTAACATAACCAACCTTGTCATCGGAATCAAAAAGCTACCATACACGCGGCGCAACAACAAATTGAGCAAAGGAGAGTTCGTAAAGAAGCATGCACCAAATACCTGTGAAGTTACCTTGGTTTATAACGGCGAGGTGTTTGTGTCTGACCCTTACATGGATGGCTTGGTATCCTATGGCCAAGCATCACAGAGTAAAAATCACTCCAAAAGCAACTTCTTTCAGTGCATGTGCTTTTCAGGGTGCATGAGAGAAGATGATGGTTGCTAG 957 0.419 MEDANHTPREAKDYYSRSIWLSETAQAFGDLKRGDRNGVNGFHFTAGRDSCDYNSQEIVTPEISGAFEEIKSLISTRNGVNDEVVGQENGDYGRYSIQTLSTEIVEIVEDGNSITKNKDRRVDDLYVAVGKDDLDAVKWALDHAVSPGSRIFLIHVSSPITSIPTPVGRFERSKLTPQQVRLYVNEVNNKRKDLLQKYIKMSNEANVIAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYTRRNNKLSKGEFVKKHAPNTCEVTLVYNGEVFVSDPYMDGLVSYGQASQSKNHSKSNFFQCMCFSGCMREDDGC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01157 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 270 - -
Lapu3g01157 318 Coils Coil 184 204 - -
Lapu3g01157 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 87 312 - -
Lapu3g01157 318 Gene3D HUPs 120 274 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01157 Lapu-Chr3 12517607 12519689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01157 123 278 U-box Gene Family AT3G61390 30.247 3.32e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01157 - - pvu:PHAVU_003G204300g 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01157 3 12517607 12519689 Lapu3g01157 3 12517607 12519689 ECH