Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g01145 | ATGCCTGTAAATCCATGGACCCTCTTCTTCTTATGCATTTCCCTTCTACTCCCATTCCATTTTCTCATAGTTGCTGCAGTAAACCAACAAGGGGAGGCTCTTCTATCGTGGAGGAGAACCCTGAACGGGTCCCTGGAGGTATTGAGTAACTGGGACCCAGTTCAAGACACCCCATGTAGCTGGTATGGAGTGAGTTGCAACACGAAGAACGAAGTAGTACAGTTGGATCTGAGGTATGTGGATTTGCTTGGAAGACTGCCCAGTAATTTCACCTCATTGCTTTCCTTAAGCAGTTTGATCTTAACCGGAACCAATCTCACGGGTTCAATTCCGAAAGAAATAGGTTACCTTGTGGAACTCAGCTACTTGGACCTAAGTGACAATGCCTTGAGTGGCGAAATACCAAGTGAGCTATGTTACTTGCCTAAACTTGAGGAACTCCATCTCAACTCCAACGACCTCGTAGGGTCCATTCCAGTTGCAATTGGGAACCTCACAAAGTTGCAGAAGCTGATCCTATATGACAATCAGCTCAGCGGGGAAGTTCCTACCACCATCGGCAACCTTAAGAGCCTTCAAGTGATAAGAGCAGGAGGAAACAAGAACCTGGAGGGTCCTTTACCTCCAGAAATTGGAAACTGTTCCAGTTTAGTGATGTTGGGCCTTGCTGAAACAAGCCTCTCAGGTTCTCTGCCACCAACTCTTGGCCTTCTTAAGAACCTTGAAACCATTGCCATTTACACTTCCTTACTATCTGGAGAAATACCACCTGAACTTGGCGACTGCACAGGGCTCCAAAACATTTACCTTTACGAGAACTCTCTCACTGGATCCATACCAAGCAATTTGGGAAACCTTAAGAACTTGGAAAACCTTCTACTGTGGCAGAACAACCTAGTTGGCACCATGCCCCACGAGATTGGCGACTGCGAGCAGTTGTCAGTGATTGACGTGTCAATGAACTCACTAACCGGAAGCATTCCCAACACTTTCGGGAACTTGACATCATTGCAAGAGCTCCAACTCAGTGTGAACCAGATTTCGGGGGAGATTCCAGCAGAACTGGGGAAGTGTCAGCAACTCACACATGTGGAGCTTGACAACAATCTCATAACGGGTACTATACCTTCCGAATTAGGAAACCTTGCGAATCTAACGCTCCTGTTCTTATGGCACAACAAGCTGCAAGGTAACATTCCCTCTTCCCTTTCCAATTGTCAAAATCTAGAGGCTATTGATCTGTCACAGAATGGATTAACGGGTCCCATACCCAACGGGATATTCCAGCTGAAGAATCTCAACAAGCTCTTGCTCCTCTCTAATAATCTCTCAGGGAAAATTCCCTCTCAGATTGGGAATTGTTCTTCCCTAATTCGATTCCGAGCGAACGACAACAACATCACCGGGAACATTCCCTCGCAGATTGGGAATCTCAAAAATTTGAATTTCCTCGACCTAGGGAACAATCGGATTTCCGGCGGTATCCCGGAGGAGATCTCCGGCTGCCGGAATCTCGCATTTCTTGATCTACATTCCAACTTTCTCGTCGGAAGCCTACCGGAAAGTTTGAGCTGGCTTAATTCGCTTCAGTTTCTCGATGTTTCCGATAACATGATCGAAGGCATACTAAACCCTACACTAGGTGAACTAACCGCGCTCTCCAAGCTTGTTCTCGCGAAGAATCGAATATCTGGCTCAATTCCGAGGCAACTCGGGTCTTGCTCCAAATTACAATTATTGGATCTCAGCAGCAACAATCTCTCTGGCGGAATTCCTGGCAGCATCGGCAACATTCCGGCATTGGAAATCGCTCTGAATCTGAGCCTGAACCAGCTATCCGGAGAGATCCCTCAGGAGTTTTCCGGATTGACGAAGCTCGGAGTGCTGGACATATCTCACAACGCTCTCAGCGGAAACATTCAATATCTCGCAGGTCTGCAAAATCTCGTGGTGCTCAATATCTCCTATAACAAATTCTCGGGACGCGTTCCGGACACGCCTTTCTTCGCGAAGCTGCCGCTGAGTGTGCTGGCGGGGAACCCGGCGCTGTGCTTTTCCGGCAACGAGTGCGGTGGCGAAGGCAGTGGGAGGTCGGGACGGCGGGCGAGGGTAGCGCGAGTGGCGATGGTTGTCCTGCTGTGCACCGCGTGCGTGCTGCTCATGGCAGCGCTGTACGTCGTCGTCGCAGCGAAACGGCGAGGGGACCGCGAAAATGACTTGGAGCTAGATGGAAAGGACAGCGACGTGGACATGGCCCCACCTTGGGAAGTGACACTGTACCAGAAACTCGATTTGTCCATCTCTGACGTAGCGAAATGTCTCACTGCTGGCAACGTCATCGGCCAAGGCCGATCCGGCGTCGTTTACAGGGTCGACTTGCCGGGCACAGGACTCGCCATCGCGGTAAAGAAGTTCCGATTATCCGAGAAATTCTCCGCGGGGGCATTCTCGTCGGAGATAGCGACGCTTGCGCGAATTCGTCATCGGAACATCGTGCGCCTATTGGGTTGGGGTGCTAACAGGAAAACCAAATTACTTTTTTACGATTATTTACTGAACGGTAACTTAGACACGCTTTTGCACGAGGGATGTACAGGATTAATTGATTGGGAGACGAGGCTCAAGATAGCGTTGGGCGTGGCTGAGGGCGTGGCTTACTTGCACCACGATTGCGTTCCTGCTATCTTGCACCGGGACGTCAAGGCGCAGAACATTTTGTTAGGAGACCGATATGAACCCTGTTTGGCGGATTTCGGTTTCGCTCGATTCGTGGAAGAGGATCACGCCTCCTTTTCGGTTAATCCACATTTCGCCGGCTCCTACGGTTACATTGCTCCCGAGTATGCTTGCATGCTTAAAATCACAGAGAAGAGCGACGTGTACAGCTTTGGAGTGGTCCTACTGGAGATAATAACGGGGAAAAGGCCAGTTGATCCATCATTCCCGGATGGGCAACATGTTATTCAGTGGGTCAGGGAGCACCTTAAGAGCAAGAAGGACCCCATCGAGGTTCTAGATTCCAAGCTCCAAGGCCATCCAGACACACAAATCCAAGAGATGCTACAAGCACTTGGTATTGCTCTCTTGTGCACAAGTAATCGTGCTGAGGATCGACCCACAATGAAAGATGTTGCAGCATTATTGAGAGAAATTCGTCACGATCCTCCACCAGGTGCTGAGCCCCACAAGCCCAAACCCAAAACAACTCAAGCTTCCTCCTATTCCTCCTCCTCAGTCACCCCTGCTCAGTTGCTGCTCCTGCAATCTACTTCCAACTCCTCATCACTTGCTTATTCCTCTTCCTCAGCAGCAGCCTACCTCCCTCCCAGGAATCAATCCTGA | 3342 | 0.4976 | MPVNPWTLFFLCISLLLPFHFLIVAAVNQQGEALLSWRRTLNGSLEVLSNWDPVQDTPCSWYGVSCNTKNEVVQLDLRYVDLLGRLPSNFTSLLSLSSLILTGTNLTGSIPKEIGYLVELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNDLVGSIPVAIGNLTKLQKLILYDNQLSGEVPTTIGNLKSLQVIRAGGNKNLEGPLPPEIGNCSSLVMLGLAETSLSGSLPPTLGLLKNLETIAIYTSLLSGEIPPELGDCTGLQNIYLYENSLTGSIPSNLGNLKNLENLLLWQNNLVGTMPHEIGDCEQLSVIDVSMNSLTGSIPNTFGNLTSLQELQLSVNQISGEIPAELGKCQQLTHVELDNNLITGTIPSELGNLANLTLLFLWHNKLQGNIPSSLSNCQNLEAIDLSQNGLTGPIPNGIFQLKNLNKLLLLSNNLSGKIPSQIGNCSSLIRFRANDNNITGNIPSQIGNLKNLNFLDLGNNRISGGIPEEISGCRNLAFLDLHSNFLVGSLPESLSWLNSLQFLDVSDNMIEGILNPTLGELTALSKLVLAKNRISGSIPRQLGSCSKLQLLDLSSNNLSGGIPGSIGNIPALEIALNLSLNQLSGEIPQEFSGLTKLGVLDISHNALSGNIQYLAGLQNLVVLNISYNKFSGRVPDTPFFAKLPLSVLAGNPALCFSGNECGGEGSGRSGRRARVARVAMVVLLCTACVLLMAALYVVVAAKRRGDRENDLELDGKDSDVDMAPPWEVTLYQKLDLSISDVAKCLTAGNVIGQGRSGVVYRVDLPGTGLAIAVKKFRLSEKFSAGAFSSEIATLARIRHRNIVRLLGWGANRKTKLLFYDYLLNGNLDTLLHEGCTGLIDWETRLKIALGVAEGVAYLHHDCVPAILHRDVKAQNILLGDRYEPCLADFGFARFVEEDHASFSVNPHFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPVDPSFPDGQHVIQWVREHLKSKKDPIEVLDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAALLREIRHDPPPGAEPHKPKPKTTQASSYSSSSVTPAQLLLLQSTSNSSSLAYSSSSAAAYLPPRNQS* | 1114 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 117 | 141 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 165 | 189 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 334 | 358 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 430 | 454 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 286 | 310 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 478 | 502 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 382 | 406 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 550 | 574 | IPR003591 | - | |
Lapu3g01145 | 1113 | SMART | LRR_typ_2 | 526 | 549 | IPR003591 | - | |
Lapu3g01145 | 1113 | MobiDBLite | consensus disorder prediction | 1052 | 1076 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 574 | 600 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 117 | 149 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 526 | 544 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 165 | 191 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 623 | 645 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 382 | 411 | - | - | |
Lapu3g01145 | 1113 | SMART | LRR_sd22_2 | 478 | 501 | - | - | |
Lapu3g01145 | 1113 | ProSitePatterns | Protein kinases ATP-binding region signature. | 780 | 804 | IPR017441 | GO:0005524 | |
Lapu3g01145 | 1113 | SUPERFAMILY | RNI-like | 316 | 664 | - | - | |
Lapu3g01145 | 1113 | Pfam | Protein kinase domain | 777 | 1044 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g01145 | 1113 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 895 | 907 | IPR008271 | GO:0004672|GO:0006468 | |
Lapu3g01145 | 1113 | Gene3D | Ribonuclease Inhibitor | 201 | 325 | IPR032675 | - | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase RCH1 | 851 | 1065 | - | - | |
Lapu3g01145 | 1113 | Pfam | Leucine rich repeat | 576 | 636 | IPR001611 | GO:0005515 | |
Lapu3g01145 | 1113 | Pfam | Leucine rich repeat | 288 | 347 | IPR001611 | GO:0005515 | |
Lapu3g01145 | 1113 | SMART | serkin_6 | 774 | 1048 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g01145 | 1113 | SUPERFAMILY | RNI-like | 75 | 396 | - | - | |
Lapu3g01145 | 1113 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 608 | 689 | - | - | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 520 | 607 | - | - | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase RCH1 | 27 | 200 | - | - | |
Lapu3g01145 | 1113 | SUPERFAMILY | Protein kinase-like (PK-like) | 763 | 1050 | IPR011009 | - | |
Lapu3g01145 | 1113 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 463 | 1049 | - | - | |
Lapu3g01145 | 1113 | Gene3D | Ribonuclease Inhibitor | 426 | 694 | IPR032675 | - | |
Lapu3g01145 | 1113 | Pfam | Leucine rich repeat N-terminal domain | 28 | 67 | IPR013210 | - | |
Lapu3g01145 | 1113 | Gene3D | Ribonuclease Inhibitor | 25 | 200 | IPR032675 | - | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 425 | 519 | - | - | |
Lapu3g01145 | 1113 | Gene3D | Phosphorylase Kinase; domain 1 | 756 | 850 | - | - | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase | 763 | 850 | - | - | |
Lapu3g01145 | 1113 | Gene3D | Transferase(Phosphotransferase) domain 1 | 851 | 1059 | - | - | |
Lapu3g01145 | 1113 | ProSiteProfiles | Protein kinase domain profile. | 774 | 1048 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g01145 | 1113 | FunFam | LRR receptor-like serine/threonine-protein kinase RCH1 | 201 | 424 | - | - | |
Lapu3g01145 | 1113 | Gene3D | Ribonuclease Inhibitor | 326 | 425 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g01145 | Lapu-Chr3 | 12334090 | 12338636 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g01145 | 26 | 1103 | Receptor kinase-like Gene Family | AT5G56040 | 54.646 | 0.0 | 1127 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Lapu3g01145 | Pkinase | 2e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g01145 | - | - | gmx:100778064 | 1877.83 |