Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01129 ATGCAGAGCACACTTCTTTCTTTCTCCCCTTTGCTCTCTCTCCGCAAACCTCACACCCCTCTCTCTCCCTCTGCTTCCAAACTCAACCACATTCTCACTTCCTCTTCCTTCGCATGTCAACCATCTTCTCTTTCTCCTTCTCCTTCTTTTCTTTCTTTCAAACTTGTTCCCTCTCGTCCCTTTCTCCATGCCAGACCAACCTCCTTGCCGGAGAGCAGCGACGGCGAGTTCTCCGGCGGAAACAGTCTGCTCAACATTCTCGAACTGGGTGCCCTGTTTGCGTTCTGGATCCTCTTCAACATCTACTTCAATATCTACAACAAACAGGTCTTGAAGGTTTACCATTTCCCTTTAACCGTTAGCACGATTCAGTTTGCTATGGGGTCTCTCCTCGTGGCGTTCATGTGGGGTTTTAATCTGTACAAGAGGCCTAAACTCAGTGGCGCCCAGCTTGCAGCGATATTGCCACTGGCTCTGGTTCACACTTTAGGGAATCTGTTTACTAACATGAGTCTTGGAAAGGTTGCTGTGTCTTTCACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTTCTTGGAGAGAATCCTACTGCATGGGTGATTGGTTCCCTTGTGCCCATTGTTGGTGGGGTGGCGCTAGCATCTGCTACCGAGTCCTCTTTCAATTGGGTGGGATTTTGGAGTGCGATGGCTTCCAATTTGACAAATCAGTCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAACACGGAGGAATCTATGGACAACATAACGCTCTTCTCAATAATAACTGTTATGTCCTTTTTGATATCAGCACCTGTAACTTTGTTAATGGAGGGTGTCAAATTTACCCCTACTTACCTGCAATCTTCTGGATTAAATGTTAACGAAGTGTACATCAGATCTATTCTTGCTGCACTATGTTTCCATGCGTATCAGCAAGTCTCTTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATCTTCTTCCGAACTCCAGTATCACCAATTAACGCACTTGGCACTGCTATAGCTCTTGCCGGTGTTTTCCTGTATTCCAGGGTGAAGCGACTTAAGCCAAAGACAGTTTAA 1164 0.4553 MQSTLLSFSPLLSLRKPHTPLSPSASKLNHILTSSSFACQPSSLSPSPSFLSFKLVPSRPFLHARPTSLPESSDGEFSGGNSLLNILELGALFAFWILFNIYFNIYNKQVLKVYHFPLTVSTIQFAMGSLLVAFMWGFNLYKRPKLSGAQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGENPTAWVIGSLVPIVGGVALASATESSFNWVGFWSAMASNLTNQSRNVLSKKLMVNTEESMDNITLFSIITVMSFLISAPVTLLMEGVKFTPTYLQSSGLNVNEVYIRSILAALCFHAYQQVSYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRVKRLKPKTV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01129 387 PANTHER SOLUTE CARRIER FAMILY 35 88 381 - -
Lapu3g01129 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 223 - -
Lapu3g01129 387 Pfam Triose-phosphate Transporter family 88 377 IPR004853 -
Lapu3g01129 387 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 87 385 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lapu3g01129 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01129 Lapu-Chr3 12178439 12182076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01129 1 385 Antiporters AT5G33320 65.366 3.67e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01129 K15283 - gmx:100780925 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01129 3 12178439 12182076 Lapu3g01129 3 12178439 12182076 ECH