Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01126 ATGGAAGAAACATTTGTTCCATTGCGTGGGATCAAGAATGATCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTCATATCTTTTGGGGAGCAACTGGAGAGAAATACAGATGGAACTCTAACGGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATTCATTCTATCTTAGGAGGGCAGCCCCTCCTCATACTTGGTGTAGCCGAGCCAACAGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGACAGAAAGGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGCGTTGCTCTTCTTGCTGGCCATTGTTGGTGCATGCTCAATAATCAACAGATTCACACGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCCATACGGGGACTTGTGGAAGAGTTCGGTGTGCCTCAGTCACAGAGAGAAGGTACCAATCAGATTGCACTCCAATCTTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTAAGAAGCCGTAAGGCTAGATCCTGGCGATACGGAGCAGGTTGGTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATACCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGGGCATACACAAATTGGACCGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCGGTGCTTTATTACTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGATCTTCTCCTCTTGGGATTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCCCCATCGAACGGTGTGATTCCTCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTCTTGCGTAACAAAATTGTATCTGCCGCACGGAAAAGCATGCAGAAAAATATGAACCTGAATCAGTTATACCAAAGTATGCAAGAAGCATACAATCAAATGCAGACTCCATTAGCCCACCAAATACCACCTGCCTTGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGATTCCCCTGTTGATGGGATTGTATTCGATGTGGATAAAGATGTTGATGACCTTTTACCTGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTACAGTTTGTGTTGCTGCTATGCCTTTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTTTTCACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGACCTTTATTGAGACCGTGCCTTTCAAAACGGTTGCCATGTTTACCTTATTCCAGACCGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTCCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAGTTGGATGCTGCAGCATATGAGGAAGCACCTGCTGTTAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCACTATTAATAGTGGGGAAATTCTTGACGAAATTAATACAAGGAGTCGTGAGGAGATCCTCAATCAGAAATCAAGGAATTCAACTCCAACATCATGTGGGTATACTATTCCTGCTTATGCAAATATCTCAAAGGATTCAATGCCCATTAGTAACTCAATTGAGAGGGGAAAGTCGACTAGGATCAATCATGATAATGAAGGAGATCAAGTTCAAGAAAAGTACTAG 2109 0.431 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFVADYGVPLMILVWTAVSYIPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKIVSAARKSMQKNMNLNQLYQSMQEAYNQMQTPLAHQIPPALGLKEMKESTIQLAQSHGYIDSPVDGIVFDVDKDVDDLLPVEVKEQRLSNLLQALMVTVCVAAMPFLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHATFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPAVSFNLSFEDSGSQTATVTINSGEILDEINTRSREEILNQKSRNSTPTSCGYTIPAYANISKDSMPISNSIERGKSTRINHDNEGDQVQEKY* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01126 702 MobiDBLite consensus disorder prediction 675 702 - -
Lapu3g01126 702 Gene3D Helical hairpin bin 18 60 - -
Lapu3g01126 702 MobiDBLite consensus disorder prediction 685 702 - -
Lapu3g01126 702 FunFam probable boron transporter 2 18 60 - -
Lapu3g01126 702 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lapu3g01126 702 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Lapu3g01126 702 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Lapu3g01126 702 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01126 Lapu-Chr3 12151421 12157243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01126 1 694 Antiporters AT3G62270 73.276 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01126 K24194 - gmx:100815420 1236.09