Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01106 ATGCCAGGTCCTGGTCCTCACCTTATGTATGCCATGGCCTCTGGTTTGGCTCTCACTACCATCTCCAATGGAAGGTTTAGTCCTCACCACACACTCACCTACACAGTAAACGCCTTCTTTGGCCCTGATATTGGTTCTTTCTCGGAGTGGCTTGGTTCACTCTCTGGTGGCCCTGCTGATGCCTTGGGATCTGCCCTTGCAAATCTCATCCACCACCCTTTGTACTACATCCTTATTTTGGGTCTTCCTCTCTCTTTTCTCTATTCTCGGATATCCTCCTATCTTCTTCGCACACACCTTCTTGATTCTGTCTCCAGGGTGCCCCTTACGAGGATGCAATGCTTTTTCTTGATATCTGCTGGTTCTTTTACCCACTTCTTTCTTGATCATCTGTTTGAGGAGAATGGGAAAACAACCACGTACACTTGGATTTTGAGCACGGGCTGGTGGCAAAGTAGAGCACCAGTTAACCCAGATGCTGTTGTGGTAGTTGGCTTCTTATGTGCTTGCCTAATTGGTGGCTTTTTTTACCTCAACAGAGCAAGTTCCTCAAACTCCATAAAGAAAAAGTCATATCAGTCAATGCTACTTATGATATCCATAGCTTCCTTGTACTGTTTTTGGTGCGCATTCCAGATATACTGGATCAGTCCGCGTCGTCCAGCAGTTGGTGAAGAGGCTGATCTTGGTGTTCTTGTGTTTTTAGCTGTATACTTTTTCCTACCTTACGGAAGAAACTCTGGAGGGTGGAGAAACATTAACAGATTTAGCTCGGCAGCAGCCGTTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGACAATTTGTGGATGCTGCATCAGGGAAAACATTTCCAGCTTATGACCCGCGCACAGGAGAAGTGATTGCTAATGTTGCTGAAGGGGATGTTGAAGACATTAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCTAAAATGAGTGCATATGAAAGAAGTCGAATATTGCTTCGCTTTGCTGATTTGGTTGAGAAACACAGCGATGAGCTCGCTGCTCTGGAGACATGGAATGCTGGAAAGCCTTATGAACAGGCTGCCAAGTCAGAACTACCACTGTTTGTGCGTTTATTTCACTATTATGCTGGTTGGGCAGATAAAATTCACGGGCTGACCGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCGTGGAACTTTCCTTTAATTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTGAAGACTGCTGAGCAAACACCTCTAACAGCTCTCTTTGTGGCAAAACTATTGCATGAGGCTGGTCTTCCGAAAGGTGTTCTGAATGTAGTTTCTGGGTATGGTCCAACTGCTGGTGCAGCTCTCGCAAGTCATATGGACGTGGACAAGATAGCATTTACTGGCTCGACAGATACTGGAAAAATTATACTTGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTGTTCGATGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTATTCTTTAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGTACTTTTGTACACGAGCGCGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGACGTGTTGTTGGAGATCCATTCAAGAAAGATGTTGAACAAGGTCCTCAGATTGACGGAGAACAATTTGAGAAAGTCCTTAGGTACATAAGGTCTGGGATTGAGAGCAATGCTACCCTTGAATGTGGGGGTGATAGATTGGGCTCAAAGGGATTCTTTATCCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGTTAATAGCACAAGACGAAATCTTTGGCCCAGTTCAGTCAATCTTGAAATTCAAGGACATTGATGAAGTAATTCAAAGGGCAAATAACACACGCTATGGTCTAGCGGCAGGCGTGTTTACTAAGAACGTGGAAAGGGCAAACACGTTGATGCGGGCACTGAAAGCTGGAACTGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGTATTGGCAGGGAAAAAGGAATCTACAGTCTTCACAATTACCTGCAGGTGAAAGCTGTTATCACACCATTGAAAAATCCTGCTTGGATATAG 2268 0.4466 MPGPGPHLMYAMASGLALTTISNGRFSPHHTLTYTVNAFFGPDIGSFSEWLGSLSGGPADALGSALANLIHHPLYYILILGLPLSFLYSRISSYLLRTHLLDSVSRVPLTRMQCFFLISAGSFTHFFLDHLFEENGKTTTYTWILSTGWWQSRAPVNPDAVVVVGFLCACLIGGFFYLNRASSSNSIKKKSYQSMLLMISIASLYCFWCAFQIYWISPRRPAVGEEADLGVLVFLAVYFFLPYGRNSGGWRNINRFSSAAAVEDLITPQVPIRYTQHLINGQFVDAASGKTFPAYDPRTGEVIANVAEGDVEDINRAVSAARKAFDEGPWPKMSAYERSRILLRFADLVEKHSDELAALETWNAGKPYEQAAKSELPLFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLLHEAGLPKGVLNVVSGYGPTAGAALASHMDVDKIAFTGSTDTGKIILELAARSNLKPVTLELGGKSPFIVFDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKDVEQGPQIDGEQFEKVLRYIRSGIESNATLECGGDRLGSKGFFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDIDEVIQRANNTRYGLAAGVFTKNVERANTLMRALKAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVITPLKNPAWI* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01106 755 SUPERFAMILY ALDH-like 269 749 IPR016161 GO:0016491
Lapu3g01106 755 FunFam Mitochondrial aldehyde dehydrogenase 2 527 716 - -
Lapu3g01106 755 FunFam Aldehyde dehydrogenase, putative 717 743 - -
Lapu3g01106 755 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 549 560 IPR016160 GO:0016491
Lapu3g01106 755 Pfam Aldehyde dehydrogenase family 283 745 IPR015590 GO:0016491
Lapu3g01106 755 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 525 714 IPR016163 GO:0016620
Lapu3g01106 755 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 261 745 - -
Lapu3g01106 755 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 521 528 IPR029510 GO:0016491
Lapu3g01106 755 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 279 743 IPR016162 GO:0016491
Lapu3g01106 755 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 279 540 - -
Lapu3g01106 755 CDD ALDH_F2BC 272 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01106 Lapu-Chr3 11884774 11914149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01106 239 755 Aldehyde Dehydrogenase Gene Family AT3G48000 79.923 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01106 K00128 - zju:107405734 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01106 3 11884774 11914149 Lapu3g01106 3 11884774 11914149 ECH