Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01099 ATGGAGAAGGATGAAATGGGAGTTGCGGGAAGGTTGCTGGAATGGACTCCATTAGCTGCCATGATCATGGTTGAGTGCCTTGACGTGGGTCTCTCCACGTTAAGTAAAGCAGCCATGAACAGAGGAATGAACCATTTCGTCTTCGTTGTCTACTCCAACGCCCTTGCTACCCTCATTCTCCTCCCTATCTCTTTCTTCATCAACAGAACATCAAGACCGCCCCTTTCTTTCTCTCTTCTCTGCAAGTTCTTCCTCTTGGGCACTCTTGGCATAACTGTTATGCAGACTTGTGTTTTCACCGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCCATGAGCAATTTGGCTCCAGCATTCACTTTTGTGCTAGCGGTCATCCTCGGGATGGAGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTGACGGGGGCAGTGCTATCCATCTCTGGAGCATTACTCGTGACCCTTTACAAGGGCATTCCCATCACAAGCTTTCGAGTTCAACACTCTCCATCACAACCATTGCCATCTTTGTTGCCTCAAGCCAGTAACTGGGCCATTGGGGGTCTCTTCTTTGCCGCTGCTTCTCTCGCTCTTTCACTCTGTACTATTACTCAGGCAGCAATTCTTAAAGGATATTCGTCACAGTCAACTATGGTAGCCTTCTATTGCCTGTTTGGAAGTATCCAAAGTGCAATACTTTCTCTCATTGTTGTGAAGGATCCAAATGACTGGAAAATAAGCCCCGACATTGAGCTCATCTGTATATTCTATTCAGCTATTATCGGAAGTGTGGTGACATTCTCAACAACGACTTGGTGCATAAAAAGGAAAGGGCCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGGCATTGCTGCCTTTTCGAGTGTTATCTTCCTTGGTGAAACGCTTCATGTTGGCAGTGTCCTAGGCGCAGTGATAATCGCCATCGGATTTTACACAGTATTGTGGGCACAATCCAAAGAGGAAAACGCAAAAGGCCTCGAAGGTGATGAACAATCATTCCCATCTTCACAGGAGAGTCCTCTACTGGGGACAATCCCGTGA 1083 0.4681 MEKDEMGVAGRLLEWTPLAAMIMVECLDVGLSTLSKAAMNRGMNHFVFVVYSNALATLILLPISFFINRTSRPPLSFSLLCKFFLLGTLGITVMQTCVFTAIDYSSPTLGSAMSNLAPAFTFVLAVILGMEKLNIGSSISQIKVTGAVLSISGALLVTLYKGIPITSFRVQHSPSQPLPSLLPQASNWAIGGLFFAAASLALSLCTITQAAILKGYSSQSTMVAFYCLFGSIQSAILSLIVVKDPNDWKISPDIELICIFYSAIIGSVVTFSTTTWCIKRKGPVFVSLFKPVGIGIAAFSSVIFLGETLHVGSVLGAVIIAIGFYTVLWAQSKEENAKGLEGDEQSFPSSQESPLLGTIP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01099 360 MobiDBLite consensus disorder prediction 343 360 - -
Lapu3g01099 360 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Lapu3g01099 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Lapu3g01099 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Lapu3g01099 360 Pfam EamA-like transporter family 30 158 IPR000620 GO:0016020
Lapu3g01099 360 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020
Lapu3g01099 360 MobiDBLite consensus disorder prediction 339 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01099 Lapu-Chr3 11820697 11823569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01099 2 346 Nodulin-like Gene Family AT5G40240 43.750 5.27e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01099 - - psat:127073896 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01563 2 29077788 29081039 Lapu3g01099 3 11820697 11823569 ECH
Lapu3g01099 3 11820697 11823569 Lapu3g01099 3 11820697 11823569 ECH