Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01093 ATGTCGCTCAAGCGCCGCCCCGATGATGGCAAGACTCCGGACGACAAGCGGAGGAAGCCGCCCCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAGCCGTTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCAGCCCTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGAAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATCTCTCTGCCTGTCTTTACTGGAGGTCGTATTGAAGGAGAGGATGGCTCTAACCTGAGAATAAGTTTAGTTGATGGCTTAACAGGGGAGGTTGTCTGTACAGGACCTGAATCTATGGCTAAGGTGGAGATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGATTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAACCCCTTCTTACTGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAACACCATCCTCCTAGTATGTCGGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTTCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCTAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTGCTTGATACAACTAGGCACGTATACTTCCCTTCGAATTCTCAACAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACGGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAACACAGTTGCTACTGCATTAAGACAAGGGGAGAAATATGCAACTTTAGAAGATGAAGATTCTCTCATGGATGGGTCTTCACACTTAACTAATGTGCTTCACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAGACTGGAGGATTCCATTACCCACAAGCAAGTGCGTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAGTTTCGACAGCATGGGCCTTAGATATGATCAGACCCTCAGTTTTCCAGTCCAAGTCTCGAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGATGAAGATCATCTGCAATTTTTTGATACAGATCTTCAATCTCACGTTCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATTCTCGCACGCTCTACAGGCAATGGTGGTGCACGGAGGAGATGGAGAAAGGTGTGCAACGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAATACAAGTAAGGTTGTGA 1641 0.4473 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEDFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTVATALRQGEKYATLEDEDSLMDGSSHLTNVLHSPSSPKTEGSSANKLLGPQKTGGFHYPQASASSPDIMSSIYSVGGTSSLDDYCLPSFDSMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSDEDHLQFFDTDLQSHVQADLQSAVDSFILARSTGNGGARRRWRKVCNVLKWFMVRKRGNQIQVRL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01093 546 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Lapu3g01093 546 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Lapu3g01093 546 Pfam Calmodulin binding protein C-terminal domain 313 369 IPR046829 -
Lapu3g01093 546 PANTHER OS02G0177800 PROTEIN 16 445 IPR012416 GO:0005516
Lapu3g01093 546 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g01093 546 MobiDBLite consensus disorder prediction 382 419 - -
Lapu3g01093 546 MobiDBLite consensus disorder prediction 382 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01093 Lapu-Chr3 11757021 11762142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01093 1 353 Calmodulin-binding Proteins AT5G62570 60.556 2.44e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01093 - - gmx:100793156 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01093 3 11757021 11762142 Lapu3g01093 3 11757021 11762142 ECH