Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01086 ATGTCCATCCCAATTCCCAACCGTCAATTATTCATAGACGGTGACTGGAAATCCCCTGCCCTCACCAAACGGATTCCCATCATCAACCCTTCCACACAACAGATCATTGGGGATATCCCAGCCGCTACTAAGGAAGACGTCGACCTCGCCGTCGCCGCCGCCAAAGCCGCCCTCTCCCGCAACAAAGGCGCCGATTGGGCCTCCGCTTCCGGCGCCGTTCGGGCCCGCTATCTCCGCGCCATCGCTGCCAAGGTCACCGAGAAAAAACCCGAGCTCGCAAAACTCGAAGCCATCGATTGTGGAAAACCGCTGGATGAAGCGGCCTGGGACATCGACGATGTTGCTGGTTGCTTTGAGTTCTACGCTGATCTGGCTGAAAAATTGGACTCCAAGCAAAAGACTCCGGTGTCTCTTCCCATGGACTCATTCAAGAGTTACATTCTTAAGGAGCCAATTGGGGTTGTAGGATTAATAACTCCCTGGAATTATCCTCTGTTGATGGCTACGTGGAAGGTTGCTCCTGCTCTGGCTGCGGGTTGTGCTGCAATATTGAAGCCGTCTGAGTTGGCATCTGTGACCTGCTTGGAGCTAGGTGAGATTTGCAAAGAAGTTGGGCTTCCTCCTGGTGTGTTGAACATTCTCACTGGATTAGGACCTGAAGCCGGTGCTCCATTAGCAGCCCATCCTGATGTCGACAAGATTGCCTTTACTGGAAGCTCGGCAACTGGGAGCAAGATTATGACGGCAGCAGCTCAGCTGGTCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGTCCAATCATTGTCTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACCATCTTTGGTTGCTTTTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTACATGAAAGTATAGCGACAGAATTTTTGAATAGGATTGTGAAATGGATAAAAAACATCAAAATTTCTGATCCCTTGGAAGAAGGTTGCAGACTAGGCCCTGTTGTTAGTGAGGGACAGTATGAAAAAGTATTGAAGTTTATCTCAAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGGTCTCGCCCCGAGCATCTAAAGAAGGGATTCTTTGTTGAACCGACTGTCATAACTGATGTGACTTCCTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCTGTTCTTTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACTGTATATGGCTTAGGTTCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCATTACTAAGGCGTTTAAGGCTGGAATTGTGTGGGTTAATTGTTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGCAGTGGCTTTGGTCGTGAATTAGGAGAATGGGGACTTGATAATTACTTAAGTGTGAAGCAAGTGACTCAGTACATCTCTGATGAACCGTGGGGCTGGTACCAGTCTCCTTCAAAGCTGTGA 1512 0.4782 MSIPIPNRQLFIDGDWKSPALTKRIPIINPSTQQIIGDIPAATKEDVDLAVAAAKAALSRNKGADWASASGAVRARYLRAIAAKVTEKKPELAKLEAIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDSKQKTPVSLPMDSFKSYILKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLAAHPDVDKIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISNAKSEGATILTGGSRPEHLKKGFFVEPTVITDVTSSMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGSAVISNDLERCERITKAFKAGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQSPSKL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01086 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
Lapu3g01086 503 Pfam Aldehyde dehydrogenase family 19 485 IPR015590 GO:0016491
Lapu3g01086 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Lapu3g01086 503 PANTHER ALDEHYDE DEHYDROGENASE 4 502 - -
Lapu3g01086 503 CDD ALDH_F10_BADH 27 487 - -
Lapu3g01086 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Lapu3g01086 503 SUPERFAMILY ALDH-like 5 486 IPR016161 GO:0016491
Lapu3g01086 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Lapu3g01086 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Lapu3g01086 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01086 Lapu-Chr3 11664929 11670523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01086 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 81.038 0.0 868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01086 3 11664929 11670523 Lapu3g01086 3 11664929 11670523 ECH