Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01077 ATGGTGTCAACATATGAGAAGAAGAAAAACCTGAGCAAACTCATCATCCCTTCTTCTTCTTCTTCTTCTCCCAACCCATCCCCCTCCCAATCCCTCACAAGCCCACACGTCATCCACAGCAGGTCCCACTCCTTTGTGGGGCCCTCCCCGCGCTTCAATCCCTCTTCCACCCCTCTCTTCTTCGTCCACGAGGACGACGACGAAGACGAAGAAAAGGAACCTCTTGCTTCTGACCCTGTTAAGATTGGACCTTCCGATTTTCATATTCTCCGTGTTGTAGGGCAGGGTGCCTTTGGCAAGGTCTTTCTTGTCAGAAAAAACGGAAATTGCTTCGATGGTGATGGCGATGGGGTCTTCGCCATGAAGGTCATGAGAAAAGACACCGTCATAAAGAAAAACCACGTTGATTACATGAAAGCGGAGAGGGATATTCTCACTAAAGTCCTTCACCCTTTCATTGTTCAGCTACGTTACTCTTTTCAGACCAAATCTAAGTTATATTTGGTGTTGGATTTCATAAATGGAGGGCATCTCTTCTTTCATTTGTATCGCCAGGGTATCTTCAGTGAGGATCAAGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCACATCTTCACTGCAACGGCATCGTGCATCGGGATCTTAAGCCTGAAAACATTTTAATGGATGCTCATGGGCATGTCATGCTGACTGATTTTGGAATGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTCTTTGTGGGACCGTGGAATATATGGCTCCTGAAATTCTACTGGCTAAAGGCCATAACAAGGATGCGGATTGGTGGAGTGTTGGTATCCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCATTACTCAAAGGATTGCTGCAAAAGGATCCATCGACAAGGTTAGGACATGGGCCAAATGGAGATGACCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCGAAGTTTAAACCAGATGTGTCTGGAAAAGATTGTACAGCTAATTTTGACAAATGTTGGACAGCAATGCCCCCTAATGACTCGCCAGCACCCACACCGACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTGGCTCACTAGACTGA 1263 0.4489 MVSTYEKKKNLSKLIIPSSSSSSPNPSPSQSLTSPHVIHSRSHSFVGPSPRFNPSSTPLFFVHEDDDEDEEKEPLASDPVKIGPSDFHILRVVGQGAFGKVFLVRKNGNCFDGDGDGVFAMKVMRKDTVIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHCNGIVHRDLKPENILMDAHGHVMLTDFGMSKEIDELGRSNSLCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLQKDPSTRLGHGPNGDDQIKSHKWFRSINWKKLEARELEPKFKPDVSGKDCTANFDKCWTAMPPNDSPAPTPTAGDHFQGYTYVAPNPWLSSGSLD* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01077 420 ProSitePatterns Protein kinases ATP-binding region signature. 93 122 IPR017441 GO:0005524
Lapu3g01077 420 Gene3D Phosphorylase Kinase; domain 1 85 391 - -
Lapu3g01077 420 Pfam Protein kinase C terminal domain 370 407 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lapu3g01077 420 Gene3D Transferase(Phosphotransferase) domain 1 173 368 - -
Lapu3g01077 420 SUPERFAMILY Protein kinase-like (PK-like) 85 411 IPR011009 -
Lapu3g01077 420 Pfam Protein kinase domain 87 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01077 420 SMART pkinase_C_6 350 409 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu3g01077 420 MobiDBLite consensus disorder prediction 13 51 - -
Lapu3g01077 420 MobiDBLite consensus disorder prediction 1 51 - -
Lapu3g01077 420 FunFam Non-specific serine/threonine protein kinase 173 368 - -
Lapu3g01077 420 ProSiteProfiles Protein kinase domain profile. 87 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01077 420 FunFam Non-specific serine/threonine protein kinase 85 195 - -
Lapu3g01077 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lapu3g01077 420 ProSiteProfiles AGC-kinase C-terminal domain profile. 350 417 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu3g01077 420 SMART serkin_6 87 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01077 420 PANTHER RIBOSOMAL PROTEIN S6 KINASE 45 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01077 Lapu-Chr3 11554274 11558151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01077 35 410 AGC Kinase Gene Family AT3G08720 61.139 8.49e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lapu3g01077 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01077 K04688 - gmx:100798259 721.465