Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01071 ATGTCCAACGGATCCCCTCCTCCGGGGACCGGCGAACGGTCCCTGCCGCCGGAAGCCAACCCTTCAAACCATGTTTCCGATTCGAAGAAGGAAACCGCCGCGGCTCCTCCCCCAACCACCAGGAGTACCCGTCCTTCTAGGGCGTGCACCATGCGCGCCGCCTCTCGCCTCATTTCCTCGCCGGCGCCGGCGAAGAAGAAGGATTCGTCGCCGCCGCCGCCGCCGCCCCCCCATTGCGGCAAGATCGTGACTCCGCTGGTGGAGCCTCCGTCGCCTTCACAGTTGCCACGGTGGAACTTGCGGACGATGTGGGAGTTCGCTTCCGTGCTGAATTTCTTGCATCTATTTATGCCTCTTTTGAATATCTCGCTGGAATTTTCTGCGGAAGAGTTGGAGACAGCCCTTCTTACCCCCAACGATACTTTGTTTCATATTCACATGCCTTTGCTAAAGGCAATCCCTCCTATTACCCGAATGGCACTCACACGTGATACTTGGATAACCGTATTGTGCAGGAAATTGAGAGATTGGTGGCACTGGGTCACTGATGGGGATCTTCCAGTTGTTGCTTCCCATGGGGCGGAGATTGAAGTGTATAAATCACTTGATCCAGGGATCCGTGTTGTCATCTTAAAAGCAATCTGCGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAAATCAATTAAACATGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGGGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGATCCCATTATTGGACATAGGTTGTATCGAGAAATAAGGAAAACTGAAGTGATTCAAATGAAGAAAGGGAAAGCAAGAGGTTCCCAGGTTCTTTCTAGCACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAGTTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTTTGGGAAAAAAGCTGAAGATAGACATGCTTCCTGAAGTTGAGAAAGCTCAAAAGAAAAAGGAGAAATTGCTGAAAAAGCAACACAGACAAGCTCTGCTGCTTGATAATTACTTATTTGTTGATGGGCTTGGTCCAGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGGTCAATCAATGAGGCAATTAAAGTAACCAAGCAGAAACAGCCATCTCCAGAACGTATGCCCAGGAGAGAATCGGTAACAAAACCTGAAGGCTTGACTAATGGTAAATATGGTCTTCTGCATACCACACAAGATGTGAATTTTGGTATACCATCTCCAGAATCAGCTGACTCTGATGATGACAAGGAAGACCGTGAAAATGACAACTTGGATCGAAGCACTCGCATAAGACGGAGACCTAATCGGTATTCAGAAAGAGAGTTTGTTGAAGCAGTATCTTACAATGAGGCCGACTTCGACAGTGATGATGATATTGTTGGCGAAGTTGTATATGATGAAGAATATCTCAAGAAACGCAAGGATAAAAGGAAGTCTTCTAGTAGCTCTGAAGGAGAAGATGAAGAAGAAGAGTATGAATGGGACGAATACAATGTTGAAGATGATGAAGATGATGATGATGATGATGATGATTCTTCCTTGAGCATGAGTGAGGATAGTGACAAACCCCGTAAGGTCAAACAGTTGCCAGGCCGTACTAGGAGAGAAACCAAACTCAGATCTGTGGGTGAGATTCAATCAAGTCTAAGACGCAGTAAGAGAGCAACTAGAAATTCTATAAATTACCGACAATATGAGGCCTCAGAATCAGAAACTGAGTTTATCAAATCTGAGAAGTCTGATACATCAGATGATCACTCAGAACCCAGTGAGAATGGTGAATACATGATGGAAAGTGAAGATTCAGATGGCAGAGATGATGAAGAACAAGAAATGAAAGTAGATGAGCCTGCTATTTACCCTGCAGTAGAAGAGAATGAACAAAACCAGGCTCCTGAAAAATTAAGTAGTCCTGGCGAGGAGGAAGTTGAGAGCACAGGAAAGAGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCACTGGTTTTGATGATGTCCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 2136 0.4471 MSNGSPPPGTGERSLPPEANPSNHVSDSKKETAAAPPPTTRSTRPSRACTMRAASRLISSPAPAKKKDSSPPPPPPPHCGKIVTPLVEPPSPSQLPRWNLRTMWEFASVLNFLHLFMPLLNISLEFSAEELETALLTPNDTLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVTDGDLPVVASHGAEIEVYKSLDPGIRVVILKAICDIRVEQEDIRSYIDKSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKTEVIQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSLGKKLKIDMLPEVEKAQKKKEKLLKKQHRQALLLDNYLFVDGLGPGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPERMPRRESVTKPEGLTNGKYGLLHTTQDVNFGIPSPESADSDDDKEDRENDNLDRSTRIRRRPNRYSEREFVEAVSYNEADFDSDDDIVGEVVYDEEYLKKRKDKRKSSSSSEGEDEEEEYEWDEYNVEDDEDDDDDDDDSSLSMSEDSDKPRKVKQLPGRTRRETKLRSVGEIQSSLRRSKRATRNSINYRQYEASESETEFIKSEKSDTSDDHSEPSENGEYMMESEDSDGRDDEEQEMKVDEPAIYPAVEENEQNQAPEKLSSPGEEEVESTGKRRFLDLNELAPSTGFDDVPNTIMKDEDNDY* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01071 711 MobiDBLite consensus disorder prediction 518 548 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 16 49 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 66 83 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 627 643 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 549 574 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 575 601 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 670 684 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 497 517 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 424 438 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 395 465 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 1 88 - -
Lapu3g01071 711 MobiDBLite consensus disorder prediction 484 711 - -
Lapu3g01071 711 PANTHER REMODELING AND SPACING FACTOR 1 61 660 IPR028938 GO:0006355|GO:0031213
Lapu3g01071 711 MobiDBLite consensus disorder prediction 602 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01071 Lapu-Chr3 11474860 11484232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01071 - - gmx:100795519 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01071 3 11474860 11484232 Lapu3g01071 3 11474860 11484232 ECH
Lapu3g01071 3 11474860 11484232 Lapu9g00648 9 7662323 7670510 PCT