Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01067 ATGACCCTTAAGGGTGCCACAACGCAAGCCTGTGCAGCATGCAAACACCAGAGAAGAAAGTGCAATTCTGAATGCCCTCTTGCACCCTACTTCCCTGCAGACCAACCCAAGGTCTTTCTCAATGTCCACAAGCTTTTCGGAGTCAGCAACATCGTCAAGATATTGAAGATTTTGGAGCCTAACCAGAAGAAAATAGCCATGGACTCTATCATTATTCAAGCAAATTATAGGGATAAGTACCCTGTGCATGGCTGCTGGGAAGAGATTTGTAGGCTACAATACCAAATATGGCTTGCAGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTGAAATATGCAGACAGCAACAACAGCATCAACATCACCAAGTCCCTTCAATCCCCGATGATGTTACTTCACAATTAGAATTGGGCATGACACCATGTACTAATAATAATGCACTCCCATTGTTTAATCATCACACTCCTCTACCAAACACTTACAACAATAATGTGACTGCATTGTCTGTGTCACAGCAACATTCCTATTCCAACAGTAACAGCATGGATTATAGCTCCCTCTACTTAGATTCCAAGGATAATCCCATTAACCCTTTGTGGGTTCAGTACCCCTGTTCAAATAATGACAATTCTGTAGGAATGCAAACTCCATTGGTTTCTTCACAGCCGTTGGCCATCCAACAAAATGTTGTTGAGGATTATGTTGACATGCCTCCCCTTTTTGATTCAGTTGATGATAGACAATCATACATTTATTCCAAGGAGGCTTACGAGTCAAGTTCAGAAGAATCACTGAAAGATATGAGAAAGTGCACCGAACATGTTTCTGAGAATGAATTGAAGAGTGCTGCAGCCTGCTTTAGCCTTACCAGTGTCAACTAA 882 0.4184 MTLKGATTQACAACKHQRRKCNSECPLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLAEEELHAVYQQLEICRQQQQHQHHQVPSIPDDVTSQLELGMTPCTNNNALPLFNHHTPLPNTYNNNVTALSVSQQHSYSNSNSMDYSSLYLDSKDNPINPLWVQYPCSNNDNSVGMQTPLVSSQPLAIQQNVVEDYVDMPPLFDSVDDRQSYIYSKEAYESSSEESLKDMRKCTEHVSENELKSAAACFSLTSVN* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01067 293 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lapu3g01067 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 156 - -
Lapu3g01067 293 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01067 Lapu-Chr3 11431196 11432671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01067 1 256 AS2 family AT3G47870 38.411 1.49e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu3g01067 LOB 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01067 - - lang:109357116 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01067 3 11431196 11432671 Lapu3g01067 3 11431196 11432671 ECH