Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01066 ATGGGGCACAAAAAGCGAAACCCTGCGCCGCGCTCGAAACAATCCGCGGCGGCTTCTCCGGCGGTTCAATCCGGCGTCGGCGGAGCCGCCAACGGTTGCACCTCGCCGGACGCTGACGGGAGCAATGTTTCTGATCACAAACAGCATAACCCTAGCAAGATCGAATTGGCTCCGCCCCAATCCGAGGGTTCTCCTTATTCCACAATCAAGCTCGAATGCGAGCGCGCCCTCACCACGCTCCGTCGCGGGAACCACAACAAGGCAATGAAGCTGTTGCGGGAGATTTGCGCCAGAGAGGAGGGTTCGCCTCACTCGGCGTTCGTCCACCGAGTTCACAGCCTTATGTGTTTCAAAACGGCCACGGTCATCACCGACCCGAGCTCGAAGCAGCGGCATTTGAAGAACGCGCTCGAGTCGGCGCGGCGGGCGGTGGAGCTCATGCCGAATTCCGTTGAGTACGCGCATTTCCGTGCCACGGTGATGTTGGAGGCGGCAAGTGAAGGGAAGGATTACGAGGAGGTGGTGCATGAGTGCGAGAGGGGGCTCGCCATTGAGAACCCCAGTGATCCTGCCAAGGAGACGTTGCAGGATGAGAGCGAGCAGAAAGCATCATCCACTGAGGAGCGTATTGCGCATGTGCAGAATGAGTTGAGACAGCTTATTCAGAAGTCAAATATAGCTTCCTTGTCGTCTTGGATGAAGAATTTGAGTAACGGGGAGGAGAGATTTCGGTTGATTCCTATAAGGAGGACCCCGGAGGACCCCATGGAGGTGAGGCTGGTTCAGACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAGACGCCTGAGGAAAGACGGAAGGAAATTGAAGTTCGAGTAGCTGCTGCCAGGCTGTTGCAACAGAAGTCAGAGGCACCACAATCTCCGAATGAAGGAGATAGGGACGACAGACCATTGGATTCATCTGCAGGGTCTGGTCAGAGGATTGGTGATAGGAGAAGGCATGGAAATGTGAGGAAGAGTGGCTTTACAGCGGAAAGAATGAAATGGGTGCATTCATATTGGAATTCGGTTAGCATGGATCGGAAGAAGGACTTTCTCAGGGTTAAAATTTGTGATCTTAAGACGCACTATGTGTCTTCAAAGGATACTTTACCGAATGATGTCTTGTCAGAGGCTTTTTCTTATGCTGAGGCCAATAAAACTTGGAAATTCTGGCCTTGCTGCAACTGTGATGAGAAACATTCCGACCCGGATTCTCACAGGCATCATGTTGTGCAGGAGCATATGGGGACTCTTTCACCTCAAATGCAGAGACTTCTGCCCCAAAATGTGGATAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGATGTCTTAGCTGCAGTTAGAATGCTGGATAATAAAGCGAGGTTTAAAAGTCCATCACTTCCTGAGGATTTGTACTTGGATCATCATACTCTGGACTATAGTGATTGTTTTAAAGAAGCAAGCAGCTCTTACGTTGAGAAGGAAAGTTCAGGGGACACTCTTCGTAATTGTTTGGAAGAATGCAATAACCATTGTAAAATTACAGAAAATGATGTAAGAGAAGGTGTTGAAGACCAACTATCTATTACTGATCGCATTATTGATTGTTGGCCAGTATCTGATGATTCTGAGCGTGCAAAACTTCTGGGGAAAATTCATGCCATGTTTGAGACTCTTATTAGGCACAAATGTCTTGCTGCTAGTCATCTGAACAAGGTCATACAATTTACTATGGGTGAGATACAGGGTCTTGCTGCTGGTTCTCAGCTTCTAAATCATGGCGTGGACCAAACACCAATGTGCATATGCTTTCTAGGAGCTTCACAGCTTAAGACAATTTTCCAATTTCTGCAGGAAATATCTCACGCATGTGGGTTGGCCAGAAATGCTGATAAAGGTGGCAGTCCCACAAATGATTTGCAGAATATCAGTCAAGGTCCTGAGATTAAGGACAAGATTGTACTCGATGGAGATGCATCACGACTCCTGCTGGATGAGTCTTTACTGCAAATACAAGTCACTGCTGGTACAAATCAGGGGTCTATCTTGGATGATGTGACCACCCCAAGGTCCCCTGATGGAATTTCATGCTATAACGATGCTTTGCTATCCTGGATATTTTCAAGTTCCCCTATTGGGGATCAATTGACGTCATGGCTGCGTATCAGAGAAGATAAAATAAATAAAGGAAAGGAAATTGTGCAGATGCTTGAGAAGGAGTTTTATCACCTACAGAGCCTATGTGAGAAAAAGGGTGAGCGTTTAAGTTATGAGGAAGCACTGCAAACAGTAGAGGATCTATGTCTTGAAGAAGGTAAGAAGAGGGAAACTATTGGGGAATTTGTTCAGCGAAGCTATGAATCTGTCTTAAGAAAGCGAAGAGAAGAGCTCATTGAGAGTGAGAATGACATGATGTATGTCAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCTAGGAATGTCAATCAATTTGGTTACGATGAAACTTATGCTGGTGTGACTTCTCAATTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGTTCTATAGAAAATGCTATTCAGAAACTTAAGGAGCATTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAGTGTCACAGAGATGCAGCAATTGGAATTCAAGCTTGGACCTATTTCTGCTAATGATTATCGAGCAATATTAGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGATTTGGCCGAGAAGGATGCTAGAGAGAAGTCTGATGCTGCAAGTGAAGCATTTTTGGCTGAACTTGCTCTAGATTCCAAGAAGGCTGTTAAAGGGGGAAGTGATAGCACAAAACATGTTGAGAAAACAAAAGATAGGAAGAAGAATAAAGATCACAGAAAAGCAAGAGATTTGAAGACCACGGGTGACCATGTGCATTTCTCAGTGGGATCTACAATTCCCGATTCCAATCTAGTTGCACCTGAAAATGACTTCCTAGATCATGAGGTTGTTTCTATGAATGATGATGACTTAGAGCAACTTGAAGAGGAATTTAGACGCAAAATTGAGCTTGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTCCAGCGAAGGATAGAAAATGAAGCCAAACAGAGGCATCTTGCAGAGCAACAAAAAAAGTCATCTGGGTTGTACTTAGAAGTGGAAGAGGATCTTCAAGATTGTCAAACAAAGGCAGATACTGATTTGCTAGATTCATACAAACATGTAAGAGTACCTGTCCAAGACCAGTCGCCACAGGAGAATGGACCCCGAAGCAAACTGGATGGTGTGCTTACACCCACAACAAATGGTTCCATTTATTTGCATCAGTCAAAAGTTAAACAATCAGATTTGCCCAATGGAGTTGTTCGAGAGAATGGTCTACCTGTGTCTGATCGGCGCTCTGGAAAAAAACACAAACGGAGGAATTCTTCCAGACCAGTTGATGGAAAGATTGAATCTTTTTCTTCAGAAAAAGAGAATGCCGAGGATACACATTCTGATTCTCACTCGAGAGAGAAATTCAAATTTAATAACAATCAAGACACTAATAATGCATCAGTGTGGGAAAACAATGGATCAAATATGATGAAAGAGTTGCCAGTAGAAGATGCAGAGGAGGAAAGATTTCAGGCTGATCTTAAAATTGCTGTACGCCAAAGCCTGGACACATTTCAAGCTCGCGGAAATTTGCCTTCGGTTTCCAGTTTAAGAATGTCCCAGAGGGCTTCTTCACAGGTAGATAGTGTTGATTGCCCGCATGTAGAAGACCCCACTGATAATGTGAATGGGGCTACTTTGCTTGGTACTGGACTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGAACAGAGCATGATCATGTGGGCAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCTCTGGACATTTCATCAAAGGATTCAAGGAGAGAAGCTGTTGCACCTACATCCCTGCGGATAGCTCTAAGTAATCTGTATCCTCACAGTAGTTTCTTCCAGGAGGCTCAGATGAATGATGCCTCTGAGGTACTGGCGGTGATATTTGACTGCCTTCATAGATCATTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGCTGAAAGCAACTGCATGGGATCCTGGGACTGTACAAATGGTAGTTGTATAGCACATTCACTTTTTGGAATGAACATTTTTGAACAAATGAACTGCTACCACTGTGGTCTTGAATCCAGACATATGAAATATACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTACGTGATATGAAGGAAAAGTCTTCTGCAAGTTTCTTTGATAATCTTTTGAATCTTGTGGAAATGAACCATCAGTTGGCTTGCGATCCAGAAGCTGATGGCTGTGGCAAGCTGAACCACATCCGTCACTTTCTTTCAACTCCACCCCATGTTTTTATGACAGTCCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACCCTGGCAGCCCTGAGCACCACGATCAATATCAGTGTCCTTTATGGTGGTTTAAATCTTGAATGCACCCATAACTTGGTGTCAGTGGTTTGCTACTATGGTCAGCACTATCATTGCTTTGCTTATAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGGTTATTGGTGGATGGGCGGATGTTCTTGCAATGTGTGAAAGAGGACATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4914 0.44 MGHKKRNPAPRSKQSAAASPAVQSGVGGAANGCTSPDADGSNVSDHKQHNPSKIELAPPQSEGSPYSTIKLECERALTTLRRGNHNKAMKLLREICAREEGSPHSAFVHRVHSLMCFKTATVITDPSSKQRHLKNALESARRAVELMPNSVEYAHFRATVMLEAASEGKDYEEVVHECERGLAIENPSDPAKETLQDESEQKASSTEERIAHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRTPEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEAPQSPNEGDRDDRPLDSSAGSGQRIGDRRRHGNVRKSGFTAERMKWVHSYWNSVSMDRKKDFLRVKICDLKTHYVSSKDTLPNDVLSEAFSYAEANKTWKFWPCCNCDEKHSDPDSHRHHVVQEHMGTLSPQMQRLLPQNVDNEWIEMILNCSWKPLDVLAAVRMLDNKARFKSPSLPEDLYLDHHTLDYSDCFKEASSSYVEKESSGDTLRNCLEECNNHCKITENDVREGVEDQLSITDRIIDCWPVSDDSERAKLLGKIHAMFETLIRHKCLAASHLNKVIQFTMGEIQGLAAGSQLLNHGVDQTPMCICFLGASQLKTIFQFLQEISHACGLARNADKGGSPTNDLQNISQGPEIKDKIVLDGDASRLLLDESLLQIQVTAGTNQGSILDDVTTPRSPDGISCYNDALLSWIFSSSPIGDQLTSWLRIREDKINKGKEIVQMLEKEFYHLQSLCEKKGERLSYEEALQTVEDLCLEEGKKRETIGEFVQRSYESVLRKRREELIESENDMMYVSNRFELDAISNVLQEAEARNVNQFGYDETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGSIENAIQKLKEHLSIELSKIDARIIRSVTEMQQLEFKLGPISANDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKAVKGGSDSTKHVEKTKDRKKNKDHRKARDLKTTGDHVHFSVGSTIPDSNLVAPENDFLDHEVVSMNDDDLEQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQRHLAEQQKKSSGLYLEVEEDLQDCQTKADTDLLDSYKHVRVPVQDQSPQENGPRSKLDGVLTPTTNGSIYLHQSKVKQSDLPNGVVRENGLPVSDRRSGKKHKRRNSSRPVDGKIESFSSEKENAEDTHSDSHSREKFKFNNNQDTNNASVWENNGSNMMKELPVEDAEEERFQADLKIAVRQSLDTFQARGNLPSVSSLRMSQRASSQVDSVDCPHVEDPTDNVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRTEHDHVGNPCVVCALYEIFTALDISSKDSRREAVAPTSLRIALSNLYPHSSFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESAESNCMGSWDCTNGSCIAHSLFGMNIFEQMNCYHCGLESRHMKYTSFFHNINASALRDMKEKSSASFFDNLLNLVEMNHQLACDPEADGCGKLNHIRHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTTINISVLYGGLNLECTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKVIGGWADVLAMCERGHLQPQVLFFEAVN* 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 191 208 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 292 334 - -
Lapu3g01066 1637 Pfam Ubiquitin carboxyl-terminal hydrolase 1305 1612 IPR001394 GO:0004843|GO:0016579
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 1 66 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 183 208 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 1180 1211 - -
Lapu3g01066 1637 Pfam Protein of unknown function (DUF629) 345 878 IPR006865 -
Lapu3g01066 1637 Gene3D Tetratricopeptide repeat domain 64 221 IPR011990 GO:0005515
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 967 997 - -
Lapu3g01066 1637 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1304 1636 IPR028889 -
Lapu3g01066 1637 Gene3D Cysteine proteinases 1293 1635 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 302 334 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 1111 1227 - -
Lapu3g01066 1637 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Lapu3g01066 1637 Coils Coil 196 223 - -
Lapu3g01066 1637 SUPERFAMILY Cysteine proteinases 1304 1634 IPR038765 -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 1113 1151 - -
Lapu3g01066 1637 MobiDBLite consensus disorder prediction 1212 1227 - -
Lapu3g01066 1637 Coils Coil 1031 1072 - -
Lapu3g01066 1637 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1636 - -
Lapu3g01066 1637 CDD Peptidase_C19 1395 1634 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01066 67 1634 C2H2 Transcription Factor Family AT3G47890 55.304 0.0 1647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01066 - - gmx:100799759 2813.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01066 3 11419150 11429173 Lapu3g01066 3 11419150 11429173 ECH