Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01047 ATGGGAAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCGTCAAATATTTCAAAAGGCAGAGAGAAGCTTGTTAATAAAAAAGAAGGAGTAATACTTACCTCCAAGGTGCCAGAAACGGGTTTGACCTTAGAACCAACCTCTGATACTATTACCAATCATGACGAAGTCCAAGAGCTGGAAAACAAAGAAGCAGAAAATGTTTTACCTGGAAATCAAGAAATAGACTTAGTAGGATCTATTAATGAAGACGATGCAGTGGATCCAGAAAAAATAAGGCTGGAGGAAGCAGCAACAATGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCCTGAAAGGCATAATAAGGTTGCAAGCACTCATTCGTGGGCACCTGGTTAGGAGACAAGCTGTTGTTACATTATGCTCTATGTACGGTATTGTCAAGTTTCAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTGATGTCGGGTCTGAAATCCATGAGAAGTGCAATGTATTAAACCCTCTGGATGGCAAATTTGTCAAGCCAATTGCTATATCCATGAAAATTAAAAAGCTGTCAGCAAATGCTTTCATTCTTAAGCTTTTTACTTCATCATCTACGGTAATGGCACTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGCTGGTTGGAGCGATGGTCAGCATCTGAGTTTTGGAAACCAGTTCCCCAACCTAAGAAAATTCAGGATATTAAGGCTCAAAGAAAGCATAGTAGTATTTCTGTGGGAGATACTCTAACGAGTAAGTCAAAACGTACTAACAGGAAGCTTCATACCTCGAGTTTTGACTCAATCCCTGTGCAAGCAAATCCTGAATTTGAAAAACCAAAACGCAACACTAGGAAAATTCCAAGTCAACCCTCAGATCCTGTGCAGGAAAATCCACAAAATGAGCTTGAAAAGGTTAAACGTAACTTAAGAAAGGTTCATAATCCTGTTGAGAATACTGTTCCTTCTGAAGTTGAAACTGATATGCCAAAGGAACATTTGGTAAAGGCCACAGTTACCTCATCCCTTGCTGTTTCAGAACAAGAGGTCGTAAGTTTTAATGAGAAGATCAAGAAGGAAGCAGCTTTAACTATTTCCAGTGTGCTAGATATAGAAACTAATCCAAGACTTTCAGCTAGTAACGAAATGTTTGACACATCAAGCAGTAATCAAGTGGCTGTGGAATCAAAGCCCTTGACTGAAATTACATCTAAAGATAAAAACATTTCTGATGAAGTAAAAAATGAACCCATAGATTTGGCAGAGCCTATTTGTAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCACAAGGAAGATAAAATAGGCACTGAAAACCAGAAACCAAATCGAAAAGTTTCTATCGTGGCAAAGCAGGAACGTGCAGAGAATGGTATACAGAATAGTCCAACATTGCCCAGTTACATGGCAGCTACTGAATCTGCAAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCAGACCCGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCTAGGACACACAGACCAGTTCAATCAGGTGGCAAAGGGGGCAACAGAAGTGATAGAGCAGTATCATCATCTTCTAGAGATGGGAATGAGTTAAATTCTGGTGTATCTTCTGTTTACTGTGAATGA 1764 0.4008 MGKSPGKWIKTVLFGKKSSKSSNISKGREKLVNKKEGVILTSKVPETGLTLEPTSDTITNHDEVQELENKEAENVLPGNQEIDLVGSINEDDAVDPEKIRLEEAATMAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCSMYGIVKFQALVRGGRVRQSDVGSEIHEKCNVLNPLDGKFVKPIAISMKIKKLSANAFILKLFTSSSTVMALRLQYVPGDPNSVLSWLERWSASEFWKPVPQPKKIQDIKAQRKHSSISVGDTLTSKSKRTNRKLHTSSFDSIPVQANPEFEKPKRNTRKIPSQPSDPVQENPQNELEKVKRNLRKVHNPVENTVPSEVETDMPKEHLVKATVTSSLAVSEQEVVSFNEKIKKEAALTISSVLDIETNPRLSASNEMFDTSSSNQVAVESKPLTEITSKDKNISDEVKNEPIDLAEPICKDENSHLTNGDLSHKEDKIGTENQKPNRKVSIVAKQERAENGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNQTRRHSLPSSTNSKISSHSPRTHRPVQSGGKGGNRSDRAVSSSSRDGNELNSGVSSVYCE* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01047 587 MobiDBLite consensus disorder prediction 504 587 - -
Lapu3g01047 587 Pfam IQ calmodulin-binding motif 103 122 IPR000048 GO:0005515
Lapu3g01047 587 Pfam IQ calmodulin-binding motif 125 142 IPR000048 GO:0005515
Lapu3g01047 587 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Lapu3g01047 587 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Lapu3g01047 587 PANTHER IQ-DOMAIN 5-RELATED 1 542 - -
Lapu3g01047 587 Gene3D - 99 147 - -
Lapu3g01047 587 MobiDBLite consensus disorder prediction 451 476 - -
Lapu3g01047 587 MobiDBLite consensus disorder prediction 454 471 - -
Lapu3g01047 587 Pfam Protein of unknown function (DUF4005) 483 563 IPR025064 -
Lapu3g01047 587 SMART iq_5 100 122 IPR000048 GO:0005515
Lapu3g01047 587 SMART iq_5 123 144 IPR000048 GO:0005515
Lapu3g01047 587 MobiDBLite consensus disorder prediction 255 323 - -
Lapu3g01047 587 MobiDBLite consensus disorder prediction 561 587 - -
Lapu3g01047 587 MobiDBLite consensus disorder prediction 519 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01047 Lapu-Chr3 11198229 11207641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01047 1 575 IQD Protein Family AT1G74690 43.493 8.72e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01047 - - gmx:100794636 931.398