Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01041 ATGCCCAACGGAAGCTTGGAAGATCATATATTTCGCAAGGGCGCACAACCACTACCTTGGGCAACAAGAATCAAGATTGCTACGGGTGCTGCTCGAGGTCTCTCCTTCCTACATGACTCTAAGCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTGTTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGATTGGCCAAAGCAGGGCCCACTGGTGATCATTCTCATGTTTCCACTCAAGTTCTGGGCACTCACGGCTATGCTGCTCCTGAATATATTGCTACAGGTCGGTTGACTTCAAGGTGTGATGTGTATAGCTTTGGGGTTATGCTATTGGAAATACTATCAGGGCGCCAAGCTATTGATAACACAAAATCTGGAGTGGAACATAATCTGGTAGAATGGGCAAAACCCTATTTGGGTGATAGGAGGAAGTTGTTCCGGATTATGGATACCAAGTTACAAGGGCAGTACCCGCAGAGGGCAGCTTATACAGTTGCAATAATTGCCTTACAATGTATTTGTGATGCCAAGACTAGACCACAAATGTCTGAGGTTTTGGCTGCCTTGGAACACCTGCCAGCCATTAGACCTTCACCTACCCCATTTAGAGAAGACAAACCCATACCCACTCCCGTCAGAGACCCTCTCAGTCCTGCACTAAATCTCCCTTTGAGACCTAATCATCCTCAAACAAAATAG 714 0.4496 MPNGSLEDHIFRKGAQPLPWATRIKIATGAARGLSFLHDSKQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDHSHVSTQVLGTHGYAAPEYIATGRLTSRCDVYSFGVMLLEILSGRQAIDNTKSGVEHNLVEWAKPYLGDRRKLFRIMDTKLQGQYPQRAAYTVAIIALQCICDAKTRPQMSEVLAALEHLPAIRPSPTPFREDKPIPTPVRDPLSPALNLPLRPNHPQTK* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01041 237 PANTHER OS01G0588500 PROTEIN-RELATED 1 197 - -
Lapu3g01041 237 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01041 237 MobiDBLite consensus disorder prediction 201 237 - -
Lapu3g01041 237 SUPERFAMILY Protein kinase-like (PK-like) 1 205 IPR011009 -
Lapu3g01041 237 MobiDBLite consensus disorder prediction 205 221 - -
Lapu3g01041 237 PIRSF ILK 1 202 - -
Lapu3g01041 237 Gene3D Transferase(Phosphotransferase) domain 1 1 202 - -
Lapu3g01041 237 FunFam Serine/threonine-protein kinase PBS1 1 210 - -
Lapu3g01041 237 Pfam Protein kinase domain 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01041 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01041 Lapu-Chr3 11142915 11145531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01041 1 197 Glycoside Hydrolase AT3G07070 52.239 1.59e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu3g01041 Pkinase 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01041 - - gmx:100791844 389.808