Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01026 ATGATCATGGAGTCTCAGCCTCTCATGGGTTGGAGCGCTTATTATCAATTAGACGAAAGACCATTTCCATTTACATCCCAATTTTCGTACAGTGAAAATGTTGGAATGTATTCTCCAGCACACAATTTTCCTACACCAGACAACCTTGATGTTATTCCTCTTATGGAATATTACCCTTCAGATCCTTTATATGAAACACTCACCATCGAACCAACACCAAGCTTTCATCAAGGTTACGATTTTTATGATATTGAAAAGGATTTTTCTGTATGGAAAGAAGTGGATGCTGTGTTTAAATCAGAGGAGCTACTGAAAGAGGGACCAGAGAATGAAGAGAAGTTAAGAAGTGCCATTGAGACATTGGAAAGTGAGAAGAAACTTTTGGAGGAAATGCCTGATATTGAACTGGAAGATAATACAAAAAGGCTTAGACAGGCATGTTTCAAGGCCAACTACAAGAAAAGGAAGCTAGGGCAGAGGGAACCACAGTGTTCTTCTTGGAGTGGCTGTGGTAGAAGCAATGACACAGTGGAATATAGTAATGAAAGTGAAGAAGAGTTTGACATCAAGTATCTCATCTCTCAGTTGGCTTAA 594 0.3923 MIMESQPLMGWSAYYQLDERPFPFTSQFSYSENVGMYSPAHNFPTPDNLDVIPLMEYYPSDPLYETLTIEPTPSFHQGYDFYDIEKDFSVWKEVDAVFKSEELLKEGPENEEKLRSAIETLESEKKLLEEMPDIELEDNTKRLRQACFKANYKKRKLGQREPQCSSWSGCGRSNDTVEYSNESEEEFDIKYLISQLA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01026 197 PANTHER PROTEIN RKD4 106 184 IPR044607 GO:0003700
Lapu3g01026 197 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01026 Lapu-Chr3 10973291 10974520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01026 106 162 AtRKD Transcription Factor Family AT1G18790 63.793 1.58e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01026 - - gmx:100788666 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01026 3 10973291 10974520 Lapu3g01026 3 10973291 10974520 ECH
Lapu3g01026 3 10973291 10974520 Lapu9g00693 9 8538038 8538706 PCT