Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01007 ATGGATGTCGAGAACAAAGGAATAAGAGTGAAACCTGTTTTTCCATTATTCCTTTTCCTTTTCCTTTTCACCCTCTCCAGATGTGACTCTTCTTTCACACCTCATGTTAACTATCTCCTCGATTGTGGCTCCTCCCACCCCACTCAGCTCATAGATGGAAGAACCTTCAAATCTGATCGTCAAACCACTTCTCTCCTATCCACAGCTGAAGATGTGCAAATATCACTTGACTCAAATCTCTCCTCTTCTGTTCCTTCTTCGTTACTTCCTTTGTATCAAACTGCAAGGGTTTTTCAAGAGGAATCCACCTACTCCTTTTACTTATCCAAAACTGGTAGACTTTGGGTTCGTCTTTACTTCTTCCCTCTTTCTAACCCTTCACATAACCTAACAACAGCTGTTTTCTCTGTCCAAACTAATCACCATGTGCTTCTACATGACTTCTCCGCCAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTTAATGTTTCTGACACTAGATTCTCCCTTAAGTTCAAGCCCAAGAAAAGCTCCTTTGCGTTCATCAATGCAATTGAGATTGTCTCGGCCCCTGACACTCTTATTTCGGATTCTGCAACTGCACTTTCCCCACTTGGTCCATTCAAAGGCTTGTTGACATCCGCTCTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCTAACATAACTCCTGGTGATGACACTTTGACAAGAACATGGGAAAATGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTGTTTCTGTCTCCGACAAAAGCATAAAGTATCCTCATACTGGGGTTACACCTTTGATTGCTCCCAACTTGGTTTATGCAAGTGTTGTACGCATGAAGGACTCTAGAGTCATGCGACCGAATTTCAATCTTAGTTGGATGATGAACGTGGAGAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTGTAAGCAAGAGTCTTAATCAGTTATACTTTAATGTGTACATAAACGGGATTGAGGGTGTGTCAGCTTTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTTGTGTTAAATTCATGGGATATAACAAACGGTTCCATTTTGGTTCAGGTGGGACCAACCAATCTCCAACGAGGCACGACCGGTGCAATTATGAATGGAATTGAGGTGATGAAGATTAGCAACATCGCGGACAGCTTGGATGGTTTCTATTCTGTTGATGGGAAATACAAAGGGCCAAAATCAACAACCATGGAAATGAAAATTTTGGCTTACGTTGGACTTGTATCCGCTGTGACAACAATGTTGTTGCTAGTAATAATCTGCATAAGGTGGAAAAATAGGCCTCAAGGTTGGGAAAAGCATAACAGGTTCTCATCATGGCTCCTCCCTATCCATTCACCTATATCGTGTTCAAGCAAAAGCAGTTGGCGAGGCTCAACAACATCCAGTTCCCACAAGAGCAATAAACATGGTCATTGTGTCACCCCGCAAGGGCCCAAAAGGTTCTTCCCCTTCAGTGAAATGCGACAAGCCACCAATAATTTTGATGAAAATAGAGTAATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGCTAAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAACAAGGCATCAATGAGTTCAGAACGGAACTAGAAATGCTCTCAAAGCTACGCCATCGCCACCTGGTCTCATTGATGGGTTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTATGAATACATGGCTAATGGCCCTTTTCGTTCCCACCTCTATGGCTTCGACCTCCCTTGTTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGCTTGCACTATCTCCACACTGGCGCAACTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAATTATATTGCCAAGGTTTCTGACTTTGGTTTGTCAAAAGCTGTCCCAGAGAAGACTCAAGTTAGCACAGCCGTGAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTACAGGAGTCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTACTATGTGCTAGACCAGTCATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAACATAGAAGAGGAATGTTGAATGAATTAATTGATCCACGTATTGCTGTGACTATCAATCCTCAATCGCTCAGTGTTTTCGGGAAAATTGCTGAGAGATGTTTAGCAGATTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCTTTGCGCCTAGAAGAAGCTGCCTCACGGATTGATGAACCTGAAGATAAAAGTTTAAGTATAGTCACAAATGAGGATAATTCTGTTTTGTTTTCTCAGATAGACAGCATATAG 2490 0.4257 MDVENKGIRVKPVFPLFLFLFLFTLSRCDSSFTPHVNYLLDCGSSHPTQLIDGRTFKSDRQTTSLLSTAEDVQISLDSNLSSSVPSSLLPLYQTARVFQEESTYSFYLSKTGRLWVRLYFFPLSNPSHNLTTAVFSVQTNHHVLLHDFSARNNDSPVFKEYLVNVSDTRFSLKFKPKKSSFAFINAIEIVSAPDTLISDSATALSPLGPFKGLLTSALEVSYRINVGGPNITPGDDTLTRTWENDGSYNIFPQGSETVSVSDKSIKYPHTGVTPLIAPNLVYASVVRMKDSRVMRPNFNLSWMMNVERSYSYLIRMHFCDIVSKSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDFVLNSWDITNGSILVQVGPTNLQRGTTGAIMNGIEVMKISNIADSLDGFYSVDGKYKGPKSTTMEMKILAYVGLVSAVTTMLLLVIICIRWKNRPQGWEKHNRFSSWLLPIHSPISCSSKSSWRGSTTSSSHKSNKHGHCVTPQGPKRFFPFSEMRQATNNFDENRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFDLPCLSWQKRLEICIGAARGLHYLHTGATQSITHRDVKTTNILLDENYIAKVSDFGLSKAVPEKTQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGMLNELIDPRIAVTINPQSLSVFGKIAERCLADCGVDRPSMGDVLWHLEYALRLEEAASRIDEPEDKSLSIVTNEDNSVLFSQIDSI* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01007 829 Pfam Malectin-like domain 40 399 IPR024788 -
Lapu3g01007 829 Gene3D - 33 193 - -
Lapu3g01007 829 Gene3D - 217 401 - -
Lapu3g01007 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lapu3g01007 829 FunFam Receptor-like protein kinase FERONIA 217 401 - -
Lapu3g01007 829 Gene3D Phosphorylase Kinase; domain 1 482 597 - -
Lapu3g01007 829 FunFam receptor-like protein kinase FERONIA 484 597 - -
Lapu3g01007 829 ProSiteProfiles Protein kinase domain profile. 522 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01007 829 SMART serkin_6 522 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01007 829 FunFam Receptor-like protein kinase FERONIA 598 812 - -
Lapu3g01007 829 CDD STKc_IRAK 528 791 - -
Lapu3g01007 829 Gene3D Transferase(Phosphotransferase) domain 1 598 818 - -
Lapu3g01007 829 SUPERFAMILY Protein kinase-like (PK-like) 499 792 IPR011009 -
Lapu3g01007 829 FunFam Putative receptor-like protein kinase 37 193 - -
Lapu3g01007 829 PANTHER OS07G0166700 PROTEIN 508 797 IPR045272 GO:0004714|GO:0006468
Lapu3g01007 829 Pfam Protein tyrosine and serine/threonine kinase 525 719 IPR001245 GO:0004672|GO:0006468
Lapu3g01007 829 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01007 Lapu-Chr3 10819889 10822393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01007 27 810 Receptor kinase-like Gene Family AT5G61350 59.675 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu3g01007 Malectin_like 5.3e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01007 - - gmx:100814982 1278.46