Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01005 ATGAAAAAGGTCCACCATCACCATTGTCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCACAACAACAGAGCTCAGAGCAATTGCTACAGCCTCCCTCACCACCTCCCCTCCCCTCCCCCTCCCCTCCCCTCCCCTCCACCTCACAGTAGAGTCTCTTCACATGTTTTTGAATCCTCATCATTAAAGGATGATGTATCAGCTCTAGACTCTCCATCTCCACTAGTAGCACCATCTTCTTTGGCACCTCCTCCACCTCCCCCAATGTATGGAGCACCACCTCCACCTCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCCCCAATGTATGGAGCACCACCTCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGCGGTCCTCCTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTAGACCTCCTGGGGGTGGACCTCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGTCCTACGGGAGGTGCGGCGCCCAAACGATCCTCTTTAAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAGAGACATGGAGAACCACAAATTGCACCAGAGTTCGATGTTTCAGAGCTAGAGAAGCTTTTCTCTTTAAATGTTCCAAAACCTGCTGATTCTGGTGGAAAATCTGGAGGGCGGGGCAAGTCGGCTGGATCTAAAACTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATCATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTTTGGACGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACCAAAGAGGAAATGGATCTTATAAAGGGATACACTGGTGACAAGGAAGTTTTAGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTTCATTCAAGATTCAGTTTGGCTCCCAGGTTACGGAATTTAAGAAAAGTTTAAACATTGTTAACTCTGCCTGTGATGAGGTCCGAAATTCTGCTAAACTGAAGGAGATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACCGACACCCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTTGCTGATAAGTCCCCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGGTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATTATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGACGGACCTGTTTCCGAAGTTTTCCATGAGAAATTGAAAGAATTTATTGCTGTAGCTGAGTCAGAGGTAGCATATCTAACAAACCTATATTCTGTAGTGGGTAGAAATGCTGATGCACTTGCGCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACCACCCTGCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATTTGAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCATTAACTTGACGAAGAAGGGTGCAAAAGATAGTTGA 1800 0.4567 MKKVHHHHCHQLKRHLFSQILQHNNRAQSNCYSLPHHLPSPPPPLPSPPPHSRVSSHVFESSSLKDDVSALDSPSPLVAPSSLAPPPPPPMYGAPPPPPPPGGRGPPPPPPPMYGAPPPPPGGRGPPPPPPPGGRGPPPPPPPGVPGAPRPPGGGPPPPPPLGAKGANVGADPRGRGRGYARPTGGAAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSLNVPKPADSGGKSGGRGKSAGSKTDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKEVLGKCEQFFLELMKVPRVESKLRVFSFKIQFGSQVTEFKKSLNIVNSACDEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPKLLDFHLDLVSLEGSTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHEKLKEFIAVAESEVAYLTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENLKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01005 599 SMART it6_source 184 599 IPR015425 -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 31 196 - -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 574 599 - -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 36 51 - -
Lapu3g01005 599 Coils Coil 466 486 - -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 238 260 - -
Lapu3g01005 599 Coils Coil 560 589 - -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 79 164 - -
Lapu3g01005 599 PANTHER FORMIN-J 106 593 - -
Lapu3g01005 599 Gene3D Formin, FH2 domain 186 571 IPR042201 -
Lapu3g01005 599 ProSiteProfiles Formin homology-2 (FH2) domain profile. 184 585 IPR015425 -
Lapu3g01005 599 Pfam Formin Homology 2 Domain 189 559 IPR015425 -
Lapu3g01005 599 SUPERFAMILY Formin homology 2 domain (FH2 domain) 262 587 - -
Lapu3g01005 599 MobiDBLite consensus disorder prediction 54 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01005 Lapu-Chr3 10789577 10812474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01005 162 599 FH2 protein (formin) Gene Family AT5G07740 78.685 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01005 - - pvu:PHAVU_003G1878000 780.015