Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00979 ATGTCACCTTGGCTTCTAGGTTTTGTTACTATTGTAGTAACTATCCTTATTTACCGTCTTCTCAAGTTCATAACCGGCCATTCATTACCACTGCCACCAGGGCCAAGCCCATGGCCCATAGTGGGAAATTTGCCTCACATGGGCCGTGCGCCACACCAGACACTGGCGGCCTTGGCCCATAAGTATGGCCCGCTGATGCACCTTCGGTTGGGGTTTGTTGACGTTGTGGTGGTGGCTTCGGCCGCCGTGGCAGAGCAGTTCTTGAAGGTTCACGATGCGAAGTTTTTGAGCCGGCCACTAAGCTTCATGAACAAATACATGAGCTATTACAAAGAGGACTTTGGGTTTGCTCCCTATGGCCCACGGTGGCGGTTGCTCAGAAAAATAAGCTCAACTCACATGTTCTCCGGTAGGGCTATGGATGAATTTAGAGAAGTGCGTCAGGAAGAGCTAGAGAGATTGATATGTAAGTTGGCAAGTTCAGACTCAAGAGCAGTGAAATTGGGACAATTGTTGAATGTATGTGTTACTAACACACTGACAATGATGATGATGGGACAAAGAGTTTTCAATGATGGAAATAATGATTGGGATCCAAAAGCAGATGAGTTTAAATCTATAGTGCTAAAGCTCATGAATTTGTCAGGAGTTTTTAATATTGGTGACTACATTCCATTCTTGGCTTGGCTAGACCTTCAAGGCCTAAAAGCCGAAGCAAAAAAACTACGCAAGAGGTTTGATGCATTTTTTAGTACGGTTCTTGAGGAACATCGTATTTCCAAGAATGAGAAACACCAGAACTTTTATTTGACTACTTTGTTGTCATTGAAAGAAACTCCTCAAGAAGGATACAAACTTTCTGAAGATGAGATCAAAGCAATACTGGTGAACATGTTTGGAGCTGGAACAGACACAACATCAAGCACAATTGAATGGACAATGGCTGAACTAATTAGGAACCCAAGATGTATGGTTGAGGTGCAAGAAGAAATCGATAATGTTGTGGGTCGAGATAGACTTGTGAGTGAACTTGACTTGCCCCAACTTCCTTACCTACAGGCTGTGGTGAAGGAAACATTTCGTTTACACCCACCAACCCCTCTTTCTATTCCACGATATGCTGAAAAGAGTTTTGAGACATCTGGTTACCACATTCCCAAAGGTGCAACTCTCTTAGTCAATGTTTGGGCTATAGGACGTGACCCTAACGAGTGGTCAGACCCACTGGTGTTCAAGCCTGAAAGGTTCCTCCTTGGTGGTGAGAAGGCTGGTGTGGACGTTAGGGGCAACAACTTTGAGGTTATACCCTTTGGTGCTGGACGCAGAATATGTGCTGGTATGAGCTTAGGTCTAACGCAGGTTCAACTACTCACTGCTACCCTAGCTCATGCATTTGATTGGGAGTTAGAGAATGGACTTGACCCTAAATGTCTCAACATGGATGAAGCATATGGGCTCACCCTCCAAAGACAACTGCCTCTATGTGTTCACCCTCGTCCTAGACTCTCACACCACTTGTATTCATCGTCATCTCCCTGA 1539 0.449 MSPWLLGFVTIVVTILIYRLLKFITGHSLPLPPGPSPWPIVGNLPHMGRAPHQTLAALAHKYGPLMHLRLGFVDVVVVASAAVAEQFLKVHDAKFLSRPLSFMNKYMSYYKEDFGFAPYGPRWRLLRKISSTHMFSGRAMDEFREVRQEELERLICKLASSDSRAVKLGQLLNVCVTNTLTMMMMGQRVFNDGNNDWDPKADEFKSIVLKLMNLSGVFNIGDYIPFLAWLDLQGLKAEAKKLRKRFDAFFSTVLEEHRISKNEKHQNFYLTTLLSLKETPQEGYKLSEDEIKAILVNMFGAGTDTTSSTIEWTMAELIRNPRCMVEVQEEIDNVVGRDRLVSELDLPQLPYLQAVVKETFRLHPPTPLSIPRYAEKSFETSGYHIPKGATLLVNVWAIGRDPNEWSDPLVFKPERFLLGGEKAGVDVRGNNFEVIPFGAGRRICAGMSLGLTQVQLLTATLAHAFDWELENGLDPKCLNMDEAYGLTLQRQLPLCVHPRPRLSHHLYSSSSP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00979 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 FunFam Cytochrome P450 82C4 24 498 - -
Lapu3g00979 512 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00979 512 PANTHER CYTOCHROME P450 98A9 9 508 - -
Lapu3g00979 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Lapu3g00979 512 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00979 Lapu-Chr3 10554123 10557153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00979 8 511 Cytochrome P450 AT5G07990 58.513 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00979 K05280 - gmx:100807293 712.22