Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00978 ATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTTCGAGATGTCAATGAACAAGATGTACTTCTATTTATCGACAATATTTTCCGCTTCGTCCAAGCAGGATCTGAAGTATCTGCCTTATTAGGTCGAATGCCCTCTGCTGTGGGTTATCAACCCACTCTTAGTACTGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCCATCACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTAACTGACCCTGCCCCTGCTACGACATTTGCACATTTAGATGCTACTACTGTACTATCAAGAGGATTAGCCGCCAAAGGTCTCTTGCCTTCAGCATTATTCAAATTAGTTTCTATTATTTCAAGAATTTGTTGTGCTTCTCGTGGATCAATGTTACCACCATTTTCCGCATCACCACCATATTTTTTTGCTTAG 480 0.4104 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGLLPSALFKLVSIISRICCASRGSMLPPFSASPPYFFA* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00978 159 PANTHER ATP SYNTHASE 1 126 - -
Lapu3g00978 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 126 IPR027417 -
Lapu3g00978 159 Gene3D - 1 130 - -
Lapu3g00978 159 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 126 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00978 Lapu-Chr3 10547022 10547880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00978 2 126 Primary Pumps ATPases(2) AT1G78900 32.576 2.76e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00978 K02112 - mof:131163064 242.662