Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00961 ATGGCAGCAAAGTTCTTGCATTCCTTAGCAGATGACAACCCAGATTTACAAAAGCAGATAGGATGTATGACTGGGATTTTCCAACTCTTTGATCGACACCACATTATTTCTTCTCCCCGCATTACCCAGAAGCAACTCCCTCCAGGTAATTTTCACTTCAATTATGACAGCCTGGAAAGAGGTTCTAATAGCATACACCAGCAGCAATCAACAGCTGATGTGAGGGGTATGAATGATAAGCACAAAGTTTCAGCTGAATCATCAAGAACCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTCTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGACAGGATTGGTTTTCCTGAAACTCCTATGATGGACCCAGTTATGAACCAAGCAAGTACCTCTCCCCATTTAGGATGTCCATCCCTTGACCTGAGGGATGTGGTGAAGGACTCCATATATAGCGAAGCCAGAGGAGTGTCCAAAGAAAGGGATTCCCTGAGACAATTTCAGATGTATAAATCTGTTGATAGAAAGCAAACTCCTATTGATCTAAAGGAGTCCTTGCGAGTCCTTGCTAAACTTAGAGAAACACCTCGGCATTATGTTGAGGCTAAAGAACTTCCTAGATTATCAAATGAAGTAAGAGATGGACATTGGCAATCCATCTCAAAGGACGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTGAGATATCTTTTGAATCGCATGATACCTTTAAATGCCCACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCGCAAACGGCTCTGATTCAAAACCCAGTAACCTCTCAAGAAATTTCAATACAGGTGGTGCCTCCACCTCTGTTGACAACGCTTCTAGTCTACAACAGCGTTCAGCATCCCAGAGACGACCACCTAGTATCGTAGCAAAATTAATGGGCTTGGAAGCAATGCCAGAATCCTATGTGGCTAGTGATACCAAGTCAAGTTTGAGTGAAACTGACTCAACTCAAGGTAATGATCAGTTTGGGAAAAATAGATTCGTTAGACCACTTCCAGTTTCTAATTTCCCTGAAACCTCATTGAAAGAGAAAGAGATGACTTCCCCACGGTGGAAGACTCCTGATTTGGTTGTGAAACCAATCTTGAGTTCAAGGTTTCCCATTGAACCTGCACCATGGAAGCAGCAGGATGGAAACCAAAGCTTTGAGAAACTAACTTCCAGGGCTACAGCAAGAACACCGGGTTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATACTGGAAACAATGCAAGTAAAGGGTCTGTTAGAGACCAAAAATGAAGAACAAGCTTCAAATGTCGTTGGAAATAAAAGTGAATATGAACCAAAACCAATCACAATTCAGCATTCTATGTCTATGAGGCACGAAAAAGCCAGGGAATCTGATTCTGCAATGGCTATAGAGTCACCAATAGTGATCATGAAACCAGCAAAACTTGTTGAGAAAACTGGAGTTTCTGCTTCTTCAGTCTTTCCAATTGATAAACTTTCTGATTCCCATAAACTTCAGAGTGATGGTGTACATGTACATGATAAAAAGGGGACAGCTTCCAGTCAAATAGCAAAAGATCAGTCTCCTAGAAACAGTCGCAAGGATGCTTCTACTAGTTTTAGTGAAAAGAAAGCAAATAGTATCAAGACTATAAAATCAGCACAATCCCAACCAAGGTCTACTCTATTTCCAAAAGAAAATGGCCCAAGATCAGTAAAGAATACAGGATCTGTTAGCCCCAGAATGCAACAGAAGAAGCTAGAATTGGAGAAGCAAGCTTGCCTTCTTACCCCATCATCAGATTCAAATAATTCCAGAAGGCAGTCCTGTAAGCAGATAACAAACTCAGATTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACAGAGCAGTGATGACCGACTCAGTGAGACTAGCAATGCATTGGGAAGTTTAAGTAGCCAGTGGGATGAACTATCTCTGCAATCTGACAGTATCACTTCCGACTCAAAGATGGATATTGAAGTTACCAGCAGTTTACAATCTGCTGAAATTGTTGATAGCCAATGCCCATCTAGGAAGGCTATTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTCTGAGGTGGGATGAGGATGAATCAATTGCAGAACTTGCAACGCATGCCTCGGATCGTCCAAGTCTTGGATCAGTTGTCGACGTCTCAGTATACAAATGCGATATGCCATCCCCGGTAAAGAGTATATCCAATGCTCGTGAAGCTGACAATGCACCAGAATCTAAAGAAAATTATCATACAGATCAGTGGAGCCCTGCAGATGGCCTATTCGTTAACAGCATAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGCCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATCGATTACATAGCTTCACTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAAATACTGTTGGCTTCAGGTCTACTACTGAGAGCTTTGAGTTCTGAGTTGCAGACATTTCAACATCACTCATCAGATCTTCCCATTAATCCTGAGTTATTCCTTGTTTTGGAGCAGACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGAGGGAAGTGTTGGAAAAGTTGCTTACAGGAAGCTAAATACAGAGAAGTGGCACAGGAAACTCATCTTTGATACTGTGAACGAGATTCTTGGTACAAAGCTAGGCTCTTCTAGTGAGCCATGGTTGAAGCCTAATGGACTTACAACGAAATTAGTCACTGCACAAAAGCTTCTTAAAGAACTTTGCTTTGAGATACAAAAACTTAAACATGTGAAGCCAGATTGCAGTTTAAAAGATGAAGGGGATGGCCTGGAAAGTATGCTACGGGAAGATGTGATGTGTCACTCAGAAAACTGGACAGGTTTCCTTGGTCAATTACCCGAGGTTGTGTTGGATGTTGAGAGACAAATATTTAAGGACTTAGTTGACGAGTTTGTGATTGATTGCGAGTGA 3132 0.4135 MAAKFLHSLADDNPDLQKQIGCMTGIFQLFDRHHIISSPRITQKQLPPGNFHFNYDSLERGSNSIHQQQSTADVRGMNDKHKVSAESSRTSFSSSCSSSMSSLDYKAEADAPFDRIGFPETPMMDPVMNQASTSPHLGCPSLDLRDVVKDSIYSEARGVSKERDSLRQFQMYKSVDRKQTPIDLKESLRVLAKLRETPRHYVEAKELPRLSNEVRDGHWQSISKDAPRFSYDGRETSEISFESHDTFKCPPKLKELPRLSLDSREGSWRANGSDSKPSNLSRNFNTGGASTSVDNASSLQQRSASQRRPPSIVAKLMGLEAMPESYVASDTKSSLSETDSTQGNDQFGKNRFVRPLPVSNFPETSLKEKEMTSPRWKTPDLVVKPILSSRFPIEPAPWKQQDGNQSFEKLTSRATARTPGSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLETKNEEQASNVVGNKSEYEPKPITIQHSMSMRHEKARESDSAMAIESPIVIMKPAKLVEKTGVSASSVFPIDKLSDSHKLQSDGVHVHDKKGTASSQIAKDQSPRNSRKDASTSFSEKKANSIKTIKSAQSQPRSTLFPKENGPRSVKNTGSVSPRMQQKKLELEKQACLLTPSSDSNNSRRQSCKQITNSDSPSQKLRPKVPNSQSSDDRLSETSNALGSLSSQWDELSLQSDSITSDSKMDIEVTSSLQSAEIVDSQCPSRKAIEHLVSGSMHKKSTLRWDEDESIAELATHASDRPSLGSVVDVSVYKCDMPSPVKSISNAREADNAPESKENYHTDQWSPADGLFVNSIRYREINHKKLQSIGRLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELQTFQHHSSDLPINPELFLVLEQTKLSSLLSKEEGSVGKVAYRKLNTEKWHRKLIFDTVNEILGTKLGSSSEPWLKPNGLTTKLVTAQKLLKELCFEIQKLKHVKPDCSLKDEGDGLESMLREDVMCHSENWTGFLGQLPEVVLDVERQIFKDLVDEFVIDCE* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 539 556 - -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 632 680 - -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 62 91 - -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 266 308 - -
Lapu3g00961 1043 Pfam Domain of unknown function (DUF4378) 859 1037 IPR025486 -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 258 310 - -
Lapu3g00961 1043 Pfam DUF761-associated sequence motif 300 327 IPR032795 -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 327 348 - -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 539 619 - -
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 577 618 - -
Lapu3g00961 1043 PANTHER LONGIFOLIA PROTEIN 1 1042 IPR033334 GO:0051513
Lapu3g00961 1043 MobiDBLite consensus disorder prediction 325 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00961 Lapu-Chr3 10401087 10406482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00961 128 1039 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.170 4.90e-180 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00961 - - vum:124830690 1626.68