Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00956 ATGTCAGTGGAACTCTGTTCTCTCTTCTTGCCGCTATCTGCCTGCTCAACCATACTCACTTTTGATGTTTTGATCGGTGTTACGTTCCTTGTGGCCATTTTTGGCTACTGGCTGGTTCCCGGTGGTCTTGCTTGGGCTTTGTCCAAGTTTAGACAGGGAAAATCTCTCACCAACAAACCTGTCATTCCCGGACCTTCTGGTTTTCCGGTGGTGGGTCTGGTTCCTGCTTTCACAGGGACTCTTACTCATAGGGTCCTTGCTAAGCTTGCTCACACCTTTGATGCCAAGCCTTTGATGGCATTCTCGGTGGGGTTTACTCGTTTCATCATCTCTTCTAACCCTGACACCGCCAAAGAGATGTTGAACAGTTCAGCTTTTGCGGATCGTCCTGTCAAGGAATCTGCTTATGAACTCCTCTTCCACCGTGCAATGGGGTTTGCCCCTTACGGTGAGTACTGGAGGAACCTGAGAAGGATTTCCGCCACTCACATGTTCTCTCCAAAGAGAATTGCCGCCTCCGGCGGGTTCCGGAAGGAAGTTGGAGCCCAGATGGTGAAAGACATCATGGACCTGATGAGGAGAGATGGTGAGGTAGAGGTGAGAAAGGTGTTGCATTTTGGGTCATTGAATAACGTGATGAAGAGCGTGTTTGGAAAGAGTTACGTGTTTGGTGAGGGTGGTGATGGGTGTGAACTTGAGGAGTTGGTGAGTGAGGGTTATGAATTACTTGGGGTGTTTAACTGGAGTGACCACTTTCCACTTTTGGGTAGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAGTTTGGTGGATAGAGTGAACGTTTTTGTGGGCAAAATCATAGAGGAACACAGGGAGAAGAGGACTGCTGAAGGCGAGGATAAGGTCAGGGATAATGAGAGTTCTGGTGACTTTGTTGACGTGCTTTTGGATTTGGAGAAAGAGAACAGGCTTCAACACTCTGATATGGTTGCAGTTTTGTGGGAAATGATCTTTAGAGGAACTGATACAGTGGCAATCCTCCTAGAATGGATTCTTGCAAGGATGGTTTTATACCCTGAGATCCAAGCCAAGGCTCAGTGGGAGATAGACTCTGTTGTTGGGAGTGGGCGTAGCGTGAGTGACAATGACCTTCCCAACCTTCCTTACGTGAGGGGCATAGTGAAGGAAACTCTGAGGATGCACCCACCAGGTCCTCTTCTGTCATGGGCCAGGCTTTCAATCCATGACACACAAATTGGCAACCACTTGGTTCCAGCTGGCACCACCGCTATGGTTAACATGTGGGCCATCACTCATGACAAAGAAGTGTGGTCTGATCCAGAGGAGTTCAAACCGGAGCGTTTTGTGAAGGAGGAGGTGCAGATTATGGGGTCTGATCTGAGGTTGGCACCTTTCGGGTCTGGGAGAAGGGTGTGTCCTGGGAAAGCCATGGGATTGGCGACTGTTGAGCTTTGGCTTGCTATGTTGCTACAGAACTTGAAGTGGAAGGCTTGTGATTGTGGTGTGGACCTTTCTGAATGCTTGGAACTCTCAATGAAAATGAAATGCTCTCTGATGATCAAAGTTGTTGCAAGGCCTGCTCCTTTCATGCCTTCTGTAACCCATTCTGCTTGA 1620 0.487 MSVELCSLFLPLSACSTILTFDVLIGVTFLVAIFGYWLVPGGLAWALSKFRQGKSLTNKPVIPGPSGFPVVGLVPAFTGTLTHRVLAKLAHTFDAKPLMAFSVGFTRFIISSNPDTAKEMLNSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGGFRKEVGAQMVKDIMDLMRRDGEVEVRKVLHFGSLNNVMKSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWSDHFPLLGRLDLQGVRKRCRSLVDRVNVFVGKIIEEHREKRTAEGEDKVRDNESSGDFVDVLLDLEKENRLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVLYPEIQAKAQWEIDSVVGSGRSVSDNDLPNLPYVRGIVKETLRMHPPGPLLSWARLSIHDTQIGNHLVPAGTTAMVNMWAITHDKEVWSDPEEFKPERFVKEEVQIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAMLLQNLKWKACDCGVDLSECLELSMKMKCSLMIKVVARPAPFMPSVTHSA* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00956 539 Coils Coil 539 539 - -
Lapu3g00956 539 FunFam Cytochrome P450 78A5 54 527 - -
Lapu3g00956 539 Gene3D Cytochrome P450 48 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 Pfam Cytochrome P450 63 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Lapu3g00956 539 SUPERFAMILY Cytochrome P450 62 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00956 539 CDD CYP78 95 520 - -
Lapu3g00956 539 PANTHER CYTOCHROME P450 78A7-RELATED 19 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00956 Lapu-Chr3 10346276 10347983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00956 1 527 Cytochrome P450 AT1G74110 63.822 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00956 K20619 - gmx:100811042 856.67