Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00955 ATGGAGTCTGTGCGGTTGTCAACCACTGGATCTGCTGTCCCCCGTGGTGGCTTCTTGGCCATCTTATTGTTGTCACTGCTCTTGTGCACTACATTCTTTTCTACGGAAGCATATGATGCACTTGATCCCACTGGCAACATTACAATCAAATGGGATGTCATAAGCTGGACTCCAGACGGCTATATTGCTGTTGTCACAATGTACAACTTTCAACAGTATCGGCATATTCAGGCTCCTGGATGGATACTAGGGTGGGCATGGGCTAAAAGGGAAGTAATTTGGAATGTAGTGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAATATCCCTCATTGTTGTAAGAAGGATCCAACCGTAGTGGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCGAATTGTTGCACTGGGGGAGTCCTAACGTCATGGGCCCAGGACCCTGAACATGCAGTAAGCTCATTTCAACTTAGTGTTGGTTCTGCAGGAACAACTAATAAAACGGTCAAACTGCCAAGAAATTTTACCCTGAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCAAAGATTGTGAAACCAACTAAGTTTATTACCAAAGACAAGAGGAGAACCACTCAGGCATTGATGACCTGGAACGTTACCTGCACGTATTCTCAATTCTTAGCTCAGAAGACCCCAACGTGCTGTGTTTCTCTTTCATCCTTCTACAACAGTACAATAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTAGCAGCTGTGTAGATCCTAATTCCCCGCATTTAGCTTCAGTTGTATCACCACCAGGCAAAGCTATAAATACACCTCTGGTCCGGTGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAACTTCAATATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACAGAGTGAACTATTCACAATGGAACCTTGTTGTGCAGCACCCAAACTTTGACAATGTAACGCAGGTTTTCAGCTTTAACTACAAGCCCCTAACGCCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTACAACGATTTACTTACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGCTCTTGTTCCGAAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTCCCGCGGAGAATTTATTTCAATGGAGATAACTGTGTAATGCCACCTCCTGACGCCTATCCATGGCTGCCAAATGCTAGTTCAAAACTAGTTTTTTCTTTACTAAGCACAGTTTTTGGCACTTTAGCTTGTGTGGTAATGTTATTGACTTAA 1365 0.4454 MESVRLSTTGSAVPRGGFLAILLLSLLLCTTFFSTEAYDALDPTGNITIKWDVISWTPDGYIAVVTMYNFQQYRHIQAPGWILGWAWAKREVIWNVVGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCTGGVLTSWAQDPEHAVSSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNKTEPSSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYRVNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVFGTLACVVMLLT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00955 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
Lapu3g00955 454 PIRSF COBRA 11 454 IPR006918 GO:0010215|GO:0016020
Lapu3g00955 454 PANTHER PROTEIN COBRA 26 441 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00955 Lapu-Chr3 10327071 10330826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00955 6 453 COBRA Gene Family AT3G02210 72.160 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00955 - - vun:114177145 928.702