Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00942 ATGGAATGCAATGAAGATGATGAACTCCATGTAGCCCCTTATGCTTCTTTAACACAGTGCTTTCACTATCCTTCTCCAACCCAGAAACCTATCCTGACCTCAACAATGGAAACTGGTGAAGGCCAGACTTTAACCCATCTGGATCAACCTCATGGTTTACACCATATTCCATTTTTCTGCTCGCAATTGCACCTTCCAAGCAACAGTCACAACCCAATTCAAATCCCACTCCAAAAACCCTCTCCCAACACGTCATCAAACAGTAACAACAACAACAATTCTGATGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCAAACAGAGAATCTGCTCGCAGGTCTCGCATGCGAAAGAAGCAACAGATTGAAGTCCTGCAGTATCACGTGGATCATCTGCAGACACTAAACCATCAACTGTCCCAAAAGATCATTTACTTGCTGGAATGTAACCAACAAATCCACCAACAGAATGCTCAGCTAAAAGAGAAAGTTTCCTCTCTTCAGGTAGCACTCTCTGATTTGTTGGTTCCTGCAGGAGGTGCCGAGCAACCTCACCACATCCCTAATGGCTTCCTAGCCGAGCCTTCAACTAGACCAATTGCAAGTTCCAGAGCATAG 633 0.4471 MECNEDDELHVAPYASLTQCFHYPSPTQKPILTSTMETGEGQTLTHLDQPHGLHHIPFFCSQLHLPSNSHNPIQIPLQKPSPNTSSNSNNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQNAQLKEKVSSLQVALSDLLVPAGGAEQPHHIPNGFLAEPSTRPIASSRA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00942 210 Pfam bZIP transcription factor 103 162 IPR004827 GO:0003700|GO:0006355
Lapu3g00942 210 CDD bZIP_plant_GBF1 105 153 IPR045314 GO:0003700|GO:0006355
Lapu3g00942 210 MobiDBLite consensus disorder prediction 97 123 - -
Lapu3g00942 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Lapu3g00942 210 Gene3D - 103 157 - -
Lapu3g00942 210 MobiDBLite consensus disorder prediction 70 123 - -
Lapu3g00942 210 SUPERFAMILY Leucine zipper domain 104 155 IPR046347 GO:0003700|GO:0006355
Lapu3g00942 210 MobiDBLite consensus disorder prediction 70 96 - -
Lapu3g00942 210 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Lapu3g00942 210 FunFam BZIP transcription factor 102 153 - -
Lapu3g00942 210 Coils Coil 155 175 - -
Lapu3g00942 210 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 63 186 IPR044521 -
Lapu3g00942 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00942 Lapu-Chr3 10156299 10156931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00942 102 207 bZIP Transcription Factor Family AT5G60830 54.630 4.20e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu3g00942 bZIP_1 9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00942 - - aprc:113874797 344.739