Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00929 ATGGCTGGGGGAAGAAGGAGGAGGCACCACTTCGGCAGAATCCATGCATTCACGTGTGGGAAATCTTCCATGAAGGAAGAACACTCACTGATTGGAGGCCCTGGCTTCTCAAGGAAAGTCTATTGCAATGACCCTGAACGTGCCACCGCAAGTCTTCTCAATTATGGTGACAATTATGTCAGAACAACTAAGTATACATTGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCGTTCTTTCCGGTTTCTCCTTACTCTGGCGTCAGTAATGTTGTTCCTCTACTGGTTGTGGTAGCTGCCACAATGGCCAAAGAGTTCATTGAGGATTTTAGGAGGAAACAACAGGATATAGAGATGAATAACAGAAAAGTTAAACAACATCGTGGAGGTGGTGATTTTGCCTATTCTAAATGGAGGGATTTGACAGTTGGAGATATAGTGAGGGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCGTCAAATTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCATTGGAAGGAACTTCAAAGTTGCAAGAAGACTCGAGCTTTCAAAATTTCAGATCTGTCATCACGTGTGAAGATCCAAATGCAAATTTGTATACATTTGTTGGAAGTATGGAGCTTGAGGATCAACAGTATCCTCTTGCACCTCAACAGCTACTTCTCAGGGACTCTAAGTTGAGGAACACAGATTTTGTTTACGGTGTGGTAATCTTTACTGGACATGATACTAAGGTTATGCAGAATGCAACAGACCCTCCATCCAAGAGAAGCAAAGTTGAGAAAAGGATGGATAAGATTATCTACTGCCTCTTCTTTCTACTTATTTTGATTTCTTTCATTGGGTCCATATTCTTTGGAATTATAACAAATGATGACATTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGACACCGAAATTTACTATGACCCTAATGAACCAGTAGCTGCTGCAATTCTGCATTTCTTGACAGCACTTATGTTGTATAGTTACCTGATTCCGATTTCCTTGTATGTGTCCATTGAAATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGTGAATATGTATTATGCGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAGACTGGAACTCTGACTTGTAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGAGTTGCTTATGGACGAGTAGTTACAGAAGTGGAGAGAGCTCTATCTAGGAGACATGAATCAGATCCAGGTCAAGAGTTGAAAGAAAACAATAAGATTGCAAAGGTTAGTGAGTCAAAGTCATCCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGATCAAAGAACCCAATGCCAATGTAATCCAGAACTTCCTAAGGCTGCTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGTCACTGGTAAGGTTTCATATGAAGCTGAATCCCCAGATGAGGCAGCTTTTGTGATTGCAGCCAGGGAACTTGGATTTGAATTTTATGAAAGGACACATACAACTATTTCACTGCGTGAATTAGACCCCATAACAGGCCTGAAAACCGAAAGGTCCTACAAACTTTTGAATATATTAGAGTTTAGTAGTGCAAGAAAGCGGATGTCTGTAGTTGTAAGAGATGAAGAGGGGAAACTGTTGCTTCTTAGCAAAGGCGCTGACAGTGTTATGTTTGAACGAATTGCAAAGAATGGAAGGGATTTTGAAGAGAACACAAAGCAGCACATTAGTGAATACGCCGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACTATCAATTTAATAAAGAGTTTACAGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGATTGTTGAGGACATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGACGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGGATTAAGCTATGGGTTTTAACTGGTGATAAAATGGAGACAGCAATCAATATAGGATTTGCTTGTAGTTTGCTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCAAGAAAACAAATCATTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAGCGGCAATTAAGTCAAGTGTTATTCGTCAACTAAGGGACGCAAAGGCATTACTTTCTTCATCAGATGAAAACTATGAGGCCTTAGCCCTGATCATTGATGGGAAGTCTCTTACATATGCACTAGAAGATGACGTAAATGATTTGTTTCTTGAACTTGCCGTTGGCTGTGCATCTGTTATCTGCTGTCGTTCATCTCCCAAGCAGAAAGCACTCGTTACAAGACTGGTGAAGATGAGAACTGGTAGTACAACACTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTGGAAGGCATGCAGGCAGTTATGTCAAGTGATATTGCAATAGCCCAATTTCGGTTTCTTGAGCGCTTACTTCTTGTGCACGGACATTGGTGTTACAGAAGGATATCATCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTTGGCTTCACTCTGTTCTTCTTTGAGATATATGCTTCATTCTCCGGGCAAGCTGCATACAATGATTGGTTCATGTCACTATATAATGTGTTCTTCACTTCACTTCCTGTAATTGCACTGGGAGTGTTTGATCAGGATGTCTCTTCCAAATTATGTCTCAAGTTTCCATTATTATACCAAGAAGGCATCCAAAACATTCTATTTAGCTGGAGACGGATCATCGGTTGGGTAGTTAATGGAGTAGTGACTTCTGCCATTGTATTCTTCTTTTGCATCCGTACCATGGAACATCAAGCATTCCGTAAAGGCGGTGAAGTGGTGGAACTGGAAATTCTTGGTGCCACCATGTATACCTGTGTTGTGTGGGTGGTGAATTGCCAAATGGCATTATCTATCTCTTACTTCACTTATGTACAACATATATTCATCTGGGGAAGCATTATATTCTGGTATATTTTCCTCTTGGCATATGGAGCCATAGACCCTTCCTTCTCAACCACTGCCTATAAGGTCTTCATTGAAGCTCTTGCACCAGCACCATCTTTCTGGATCATCACTTTGCTCATTCTCATTGCTTCCCTCCTTCCATATTTTGTCTATGCGACCATCCAAATGCGTTTCTTCCCCATGTATCATCAAATGATTCAGTGGATAAGGAAGGACGGGCAAACAAGTGATCCAGAATACTGTGATATGGTAAGGCAGCGATCAATAAGACACACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTAATGCATCCAAAAGAGTTGAATCATCCTCAAGACCTGAAACAGCATCCACAATACTGGAATCATCCAAACGTTCTGAAGGCCAAACTGAGGACCGATAA 3657 0.4069 MAGGRRRRHHFGRIHAFTCGKSSMKEEHSLIGGPGFSRKVYCNDPERATASLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMAKEFIEDFRRKQQDIEMNNRKVKQHRGGGDFAYSKWRDLTVGDIVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEGTSKLQEDSSFQNFRSVITCEDPNANLYTFVGSMELEDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKVEKRMDKIIYCLFFLLILISFIGSIFFGIITNDDIENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVNMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRVVTEVERALSRRHESDPGQELKENNKIAKVSESKSSIKGFNFMDERIMNGNWIKEPNANVIQNFLRLLAVCHTAIPEVDEVTGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLRELDPITGLKTERSYKLLNILEFSSARKRMSVVVRDEEGKLLLLSKGADSVMFERIAKNGRDFEENTKQHISEYADSGLRTLILAYRELNEEEYYQFNKEFTEAKNLVSADQEQIVEDIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTQENKSLEKMEDKSAAEAAIKSSVIRQLRDAKALLSSSDENYEALALIIDGKSLTYALEDDVNDLFLELAVGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWRRIIGWVVNGVVTSAIVFFFCIRTMEHQAFRKGGEVVELEILGATMYTCVVWVVNCQMALSISYFTYVQHIFIWGSIIFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPSFWIITLLILIASLLPYFVYATIQMRFFPMYHQMIQWIRKDGQTSDPEYCDMVRQRSIRHTTVGFTARLEASKRFNASKRVESSSRPETASTILESSKRSEGQTEDR* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00929 1218 Pfam Cation transport ATPase (P-type) 532 623 - -
Lapu3g00929 1218 FunFam Phospholipid-transporting ATPase 540 698 - -
Lapu3g00929 1218 FunFam Phospholipid-transporting ATPase 116 286 - -
Lapu3g00929 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lapu3g00929 1218 SFLD p-type atpase 406 913 IPR044492 -
Lapu3g00929 1218 SUPERFAMILY HAD-like 419 917 IPR036412 -
Lapu3g00929 1218 MobiDBLite consensus disorder prediction 1186 1218 - -
Lapu3g00929 1218 SFLD Haloacid Dehalogenase 406 913 - -
Lapu3g00929 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1153 - -
Lapu3g00929 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Lapu3g00929 1218 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lapu3g00929 1218 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Lapu3g00929 1218 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Lapu3g00929 1218 Gene3D - 694 902 IPR023214 -
Lapu3g00929 1218 MobiDBLite consensus disorder prediction 1193 1209 - -
Lapu3g00929 1218 FunFam Phospholipid-transporting ATPase 698 902 - -
Lapu3g00929 1218 SUPERFAMILY Calcium ATPase, transduction domain A 143 285 IPR008250 -
Lapu3g00929 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 700 IPR023299 GO:0000166
Lapu3g00929 1218 NCBIfam HAD-IC family P-type ATPase 829 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu3g00929 1218 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lapu3g00929 1218 Gene3D - 115 286 - -
Lapu3g00929 1218 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu3g00929 1218 Gene3D - 544 677 IPR023299 GO:0000166
Lapu3g00929 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1140 IPR023298 -
Lapu3g00929 1218 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00929 Lapu-Chr3 10013735 10020288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00929 10 1188 Primary Pumps ATPases AT3G25610 69.856 0.0 1766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00929 K01530 - gmx:100799312 2176.36