Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00923 ATGGCTATTCCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTGATTCTTTTCTGTGGTGTCAATGGCACTGAGTTTGAAGTTGGTGGCCATGAAGGTTGGGTTGTCCCGAAGACAAAGGATGATTCTCAAATGTACAATCAGTGGGCATCCCAAAACAGATTCAAAGTTGATGACACTCTTCTTTTCAAGTACGAGAAAGACTCAGTTATGGAGGTGAGTGAAGAAGAATATGAAAAATGTAAATCCCCTCGTCCCCTCTTTTTCTCCAACAATGGTGACACTGTCTTCAAGTTTGACAGACCAGGCTTGTTCTACTTCATTAGTGGGGTTCGTGGTCACTGTGACAGAGGGCAGAAGATGATCATCAAGGTGTTGGATATAGAAGCAACACCCTCACCCCAGTCTGCAAATGACACTGTACCAAAGCCACATACAAGAAGTGGAGTTTCTGAACTGACACCAATGAGGATAATAACAGCATCCACACTTTTTGTTATGTCAGCCTTCTTCTTTCTGCTTTATGTTTGA 531 0.4275 MAIPFKASYPLFLCLILFCGVNGTEFEVGGHEGWVVPKTKDDSQMYNQWASQNRFKVDDTLLFKYEKDSVMEVSEEEYEKCKSPRPLFFSNNGDTVFKFDRPGLFYFISGVRGHCDRGQKMIIKVLDIEATPSPQSANDTVPKPHTRSGVSELTPMRIITASTLFVMSAFFFLLYV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00923 176 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Lapu3g00923 176 SUPERFAMILY Cupredoxins 23 126 IPR008972 -
Lapu3g00923 176 FunFam Early nodulin-like protein 1 23 130 - -
Lapu3g00923 176 Pfam Plastocyanin-like domain 42 119 IPR003245 GO:0009055
Lapu3g00923 176 PANTHER BLUE COPPER PROTEIN 25 137 IPR039391 GO:0009055
Lapu3g00923 176 Gene3D - 23 130 IPR008972 -
Lapu3g00923 176 CDD OsENODL1_like 24 126 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00923 Lapu-Chr3 9958126 9959122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00923 10 129 Phytocyanin Superfamily AT1G48940 59.167 6.09e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00923 - - var:108327897 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00923 3 9958126 9959122 Lapu3g00923 3 9958126 9959122 ECH