Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00915 ATGGCTGCAAGACGAAACTCTCATAGCCTTGGCGACCCCAAAATCCGTCGCGTCGGTTTCTTTGTTCCGGAATCTTCCACCACCGATTCCCACACCATTCCGTCGCCATGTCATCTCTCCGTGACGCTGTCAGAGATGCAGACTTTAGCCGATGCCCAAGTGACATCCCGGAGCTGCGATCCCTCGGAAAACCTAAACCTCGAAACTGGCATTGAAAAGAGGGAAGAGGGAGAAAAAGAGGTTCGGAAATCAAGGTCAAAGCCGCTAAAAGAAAAAACTACCAAGGCGGAGAGACGAGCCTTGCAGGAAGCACAGAGAGCTGCTAAAGCTGCTCCTTCTAAAGCTGAGGGAAGTAAGGCTGTTTCTGAAACTGGTAGAGCTGCCGTGGATAAAAGTACAAAGCAGTCTTCACAAAAGAAAGTTGGTCCTTCCTGTCCGTCTCCAGTGGCTGCTGATAAAAAGGCAGGAAATCGTCCTTTTGATAAAGATAGGAAAAAGGATGCTCCTCCTCCACGAATGCAATTTGATGATGAAAGTCGAGTGGAAAAGGCTAGAAGGCGTGCAGTAGTCAACCCAACTGAATCTATAAACAGAGTTGAATTATTTAAGCATTTGCCTCAATATGAACATGGGACCAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTACACCCTTCTGTATTTGAGGTGGGACAGCGTTATTCGGCAGGAGATATATCAGGGGGTAATGCTCGATGTATAGCAATGCTGAGAGCGCTGCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGGATTTAGCTTCAAAAATCAACAGTTATGTATCATTCTTTACTGAATGCAGACCACTTTCTATGAGTATGGGAAATGCAGTTAGTTTTGTAAAGAGTCGTATTGTCAACCTGTCCGTAAATCACTCTGAGTTTGAGGCAAAAACAACACTCTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTCCAATATGCTTTTACAAAGGTTAAGGATGGGGATGTGCTTCTAACGTATGGGTTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGGAAAAAGTTCCGTGTTGTCGTTGTAGATTCCCAGCCAAGGCTTGAAGGTCAGGCCTTGCTTCGTAGGCTAGTGTCGGCGGGACTGAGTTGCACATACACTCATATAAATGCTGTTTCTTATATCATGCACGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACCGTATATTCACGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTGTAACGAACTAGGTGATCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAATTATCTGGAGAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCGGTTATTGTGACAGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATTGTACGTGAATATCGACGAGAGCATTTGTTGATGTAG 1659 0.4376 MAARRNSHSLGDPKIRRVGFFVPESSTTDSHTIPSPCHLSVTLSEMQTLADAQVTSRSCDPSENLNLETGIEKREEGEKEVRKSRSKPLKEKTTKAERRALQEAQRAAKAAPSKAEGSKAVSETGRAAVDKSTKQSSQKKVGPSCPSPVAADKKAGNRPFDKDRKKDAPPPRMQFDDESRVEKARRRAVVNPTESINRVELFKHLPQYEHGTKLSNLESKFFHLGLVHPSVFEVGQRYSAGDISGGNARCIAMLRALQDAIRDYCTDHEKALVRDLASKINSYVSFFTECRPLSMSMGNAVSFVKSRIVNLSVNHSEFEAKTTLCSDIDRFINEKIILADKVIVQYAFTKVKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGQALLRRLVSAGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVLLDSICCNELGDPDAIARVPGRMDVNYLENWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYRREHLLM* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00915 552 MobiDBLite consensus disorder prediction 67 104 - -
Lapu3g00915 552 MobiDBLite consensus disorder prediction 52 187 - -
Lapu3g00915 552 MobiDBLite consensus disorder prediction 128 143 - -
Lapu3g00915 552 Gene3D - 339 545 IPR042529 -
Lapu3g00915 552 Pfam Initiation factor 2 subunit family 243 535 IPR000649 GO:0044237
Lapu3g00915 552 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 58 549 - -
Lapu3g00915 552 MobiDBLite consensus disorder prediction 155 187 - -
Lapu3g00915 552 SUPERFAMILY NagB/RpiA/CoA transferase-like 227 545 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00915 Lapu-Chr3 9903693 9908743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00915 65 552 Eukaryotic Initiation Factors Gene Family AT5G38640 64.185 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00915 K03680 - gmx:100795256 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00915 3 9903693 9908743 Lapu3g00915 3 9903693 9908743 ECH