Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00897 ATGATAAAGCAAATTCTTAGCAAATTACCAAAGAAGGTGCCAAAATCTGACTCATCAGATTCTTCAAGGAGTGATTCTAGCAATTCTACTAGTTTTGGGAATGTTTTTCAGTGTACAAATGTTGGAAGCACCATTTCAAGCAAATTAAATGTTGTGAAGAGGGTATCTTCGGTTGTTTTCCCTGCAAGCATGAGTGCTGGAGTGGAAGCAGTTGACCCCTGTCTGTCCTTCAAAGATGTTTCAAACACACAGAAGCAAAGCCTGTTCATTAGTAAGTTAAACCTTTGCTGCAAAATTTATGACATGAGTGATCCTGACAAGAACAGTACAGAGCAAGATCTCAAACGACAAACGCTGTTGGAGCTTGTTGATTTTGTTTCTTCTGGATCTGTCAAGTTCACAGAACCAGCAATCGCAGCCTTGTGTAAGATGTGTGCAACTAATTTGTTCAGGGTTTTCCCACCTAAGTTTCGAACAAGTACTGCTGGTGGAGAAACAGAAGACGAGGAACCTATGTTTGATCCTGCCTGGTCTCACTTGCAAGTTGTTTATGATCTACTCCTTCAATTCATCAACTATAACTCTCTTGATATGAAGGTGGCAAAAGCACATATTGATCATGCTTTTATTTTGAGATTACTTGACCTTTTTGATTCCGAGGACCCTAGAGAAAGAGATTGCTTGAAAACAATTCTGCATAGAATCTATGGGAAATTCATGGTTCATAGGCCTTTCATACGGAAATCTGTTAGCAACATCATCTACCGGTTTGTTTTTGAAACGGAGCGGCATAACGGAATCGCAGAGATGCTGGAGATTTTTGGTAGTGTGATTAGTGGGTTTGCCTTGCCATTGAAGGAAGAGCATAAGATATTTTTGTGGAGGGCCTTAATTCCTTTGCACAAACCTAAATCTGTTGGCATTTATCACCAGCAGTTAACATATTGTGTTGTACAGTTCATAGACAAGGATCAAAGACTGGCTAGCTCAGTGATAAAGGGACTATTGAAGTACTGGCCAGTAACAAATAGCCAAAAGGAGCTCATGTTCATCAGTGAGTTGGAAGAGATTTTGGAAATGACTAGCATGGCTGAGTTTCAGAAGATCATGGTCCCACTCTTTCGACGAATGGCTTACTGCCTTAACAGTTCTCACTATCAGGTGGCTGAACGAGCACATTTGCTATGGAACAATGAGCACATTCTGAATCTGATAACGCAAAACCGACATGTGATTCTGCCTCTAGTGTTCTCAGCACTTGTACATAATGCGCAAAGTCATTGGAACCAAGCAGTGCTGAACCTGACTCAGAACATAAGGAAGATGCTGTCTCAGATGGACGAGGAGCTGGTAGTAGCATGCCAACGTAGGATTGAAGAGGAAGATTCAGGTGCAAGTGCTGCAGCTGAGAGGAGAAGAGTAACATGGGAACGCCTAGAAGCTGCTGCTGCTGGTTACCAATCTTCTACTGTAGGTGGTGGTGATGTTTTAGTCCCAGTAAAATCTGCTACATGCTCAGTGGCATGCTAA 1530 0.419 MIKQILSKLPKKVPKSDSSDSSRSDSSNSTSFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPCLSFKDVSNTQKQSLFISKLNLCCKIYDMSDPDKNSTEQDLKRQTLLELVDFVSSGSVKFTEPAIAALCKMCATNLFRVFPPKFRTSTAGGETEDEEPMFDPAWSHLQVVYDLLLQFINYNSLDMKVAKAHIDHAFILRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSVSNIIYRFVFETERHNGIAEMLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGIYHQQLTYCVVQFIDKDQRLASSVIKGLLKYWPVTNSQKELMFISELEEILEMTSMAEFQKIMVPLFRRMAYCLNSSHYQVAERAHLLWNNEHILNLITQNRHVILPLVFSALVHNAQSHWNQAVLNLTQNIRKMLSQMDEELVVACQRRIEEEDSGASAAAERRRVTWERLEAAAAGYQSSTVGGGDVLVPVKSATCSVAC* 510
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00897 509 SUPERFAMILY ARM repeat 86 459 IPR016024 -
Lapu3g00897 509 Gene3D - 82 482 IPR011989 -
Lapu3g00897 509 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 482 - -
Lapu3g00897 509 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu3g00897 509 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu3g00897 509 MobiDBLite consensus disorder prediction 1 30 - -
Lapu3g00897 509 PIRSF PP2A_B56 3 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu3g00897 Lapu-Chr3 9671658 9676325 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00897 K11584 - gmx:100814349 914.835
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00897 3 9671658 9676325 Lapu3g00897 3 9671658 9676325 ECH
Lapu3g00897 3 9671658 9676325 Lapu9g00211 9 2029228 2043948 PCT