Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00895 ATGGGTGCTAAGCAAGAAGAACCCTTTAAGTTTGGAAGCAATCTGGTGGAAAACACCATTAGAGCAGAAAATAGCAACAATGAAGCAGGAAGCAATCATGGAAAAGCTTCTGCTGCAGCATCAGATAAGTCACCAACAGTGAAAAAAGAATTCTTTTGCAAGTATTGTAATAACAAGTTCAACAAATTATCGAGCCTTGGTGGCCATCAGAATGCACACAAGGCAGAAAGAGCATCACACATGGCTTCTGCTTATAATAAATACTTACATGTTGGACATCACACTTTCAATCATGTTCAACCCTCCATGCATCAGTTCCACAGTTTTATGGCTGCAGGCAGTGATGGATCTCATCAACAAGAGAAGCCACATCAACCTTTGCTTTTTCTCCAAGATTTGGAGAAAGACCATCAAATTCAGGTTCCTGAGAATGGAGTGGAGAAGCTTGATTTGACTCTCGAGATTTGA 468 0.406 MGAKQEEPFKFGSNLVENTIRAENSNNEAGSNHGKASAAASDKSPTVKKEFFCKYCNNKFNKLSSLGGHQNAHKAERASHMASAYNKYLHVGHHTFNHVQPSMHQFHSFMAAGSDGSHQQEKPHQPLLFLQDLEKDHQIQVPENGVEKLDLTLEI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00895 155 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Lapu3g00895 155 MobiDBLite consensus disorder prediction 17 39 - -
Lapu3g00895 155 Gene3D Classic Zinc Finger 27 105 - -
Lapu3g00895 155 MobiDBLite consensus disorder prediction 1 41 - -
Lapu3g00895 155 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Lapu3g00895 155 SUPERFAMILY beta-beta-alpha zinc fingers 48 78 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00895 Lapu-Chr3 9657675 9658396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00895 26 77 C2H2 Transcription Factor Family AT5G05120 48.077 4.10e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00895 - - gmx:102668090 94.3597