Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00875 ATGGAGGACAGGAAAGCCAACACAATCTCTGTGATAGTAGTGATTGCACTGATCATATTCATCATCGTTGCACGTGTCTCCTTGAAGCTTTCGCATGCCTTCTTCCTCATATGTGGCGCTTCTATTGCTATAATCGCCGCTGTCTTTTCATGTGCACTCATAAGGCACCGTTACAACCGCAGGAGGAGGTTGTTGGAGTCACAGTTGAAGACGGAAGGGCGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCCACGAAGTTTCGTTACAAGGAGCTTGAGGAAGCAACGGATGGGTTTCAATCACTGTTGGGAAGAGGGTCCTCAGCTACGGTTTTCAAAGGCATTCTCAGTGACGGAACTTCGGTTGCAGTGAAACGGATCGATGGAGAGGAGCGTGGGGAGAAGGAGTTCAGATCAGAAGTTGCAGCCATTGCTAGCGTACACCATGTCAACCTCGTGCGCATGTTTGGTTATTGTAACGCTCCCACAGCGCCTAGGTATCTTGTTTATGAGTATATCCCAAACGGGTCTTTGGATTGTTGGATCTTTCCCTCAAGGGAAAACCGTGCACGCAGAAGTGGGTGTTTGTCGTGGAACTTGAGGTATAAGGTTGCGATTGATGTTGCCAAAGGGTTGTCTTATCTTCACCACGATTGTAGGAGGAGGGTTTTGCACCTTGACGTGAAACCCGAGAATATACTCTTGGATGAGGATTATAAGGCTCTCGTTTCTGATTTTGGTCTCTCAACGCTTATTGGCAATGATGTGAGTCAGGTCATGACAACAATGAGGGGAACAAGAGGGTATTTGGCTCCTGAGTGGCTTTTGGAAAGAGGGGTGTCCGAAAAAACTGATATTTACAGTTATGGGATGGTTTTGTTGGAGATAATTGGAGGGAGAAGGAATGTTTTGAGGGTGGAGGATCCGAGGGACACGACTAAGAAAAAGTGGGAGTTTTTTCCCAAGATTGTTAATGAGAAAGTGAGGGAGGGGAAGTTCATGGAGATTGTGGATCCTAGGTTGATTGAAAGTGGGGGTGTTGAGGAGAGTGAGGTGATTAGACTGGTGTATATTGCATTGTGGTGTATACAAGAGAAGCCAAGGTTGAGACCTACCATGGCACAAGTGGTTGATATGCTTGAGCAGCGTGTAAGGGTGGATGAACCCCCTGGTTCCAGAATGATTCTTGTTGATTTGCTAGCTGTCGATGAAGACCCTGCGGATCATCGAAATCTTGCAAGGTTGTTGACTTCTGTTTCCAGCAATGTGGATTGTACATCTACTTACTCCCTGGGGGGAACCACTATTTTATCTGGCAGATAG 1341 0.4653 MEDRKANTISVIVVIALIIFIIVARVSLKLSHAFFLICGASIAIIAAVFSCALIRHRYNRRRRLLESQLKTEGRELRIEYSFLRKVAGVPTKFRYKELEEATDGFQSLLGRGSSATVFKGILSDGTSVAVKRIDGEERGEKEFRSEVAAIASVHHVNLVRMFGYCNAPTAPRYLVYEYIPNGSLDCWIFPSRENRARRSGCLSWNLRYKVAIDVAKGLSYLHHDCRRRVLHLDVKPENILLDEDYKALVSDFGLSTLIGNDVSQVMTTMRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVLRVEDPRDTTKKKWEFFPKIVNEKVREGKFMEIVDPRLIESGGVEESEVIRLVYIALWCIQEKPRLRPTMAQVVDMLEQRVRVDEPPGSRMILVDLLAVDEDPADHRNLARLLTSVSSNVDCTSTYSLGGTTILSGR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00875 446 PANTHER OS07G0415500 PROTEIN 29 397 - -
Lapu3g00875 446 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00875 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Lapu3g00875 446 FunFam Putative receptor-like protein kinase 70 178 - -
Lapu3g00875 446 FunFam Putative receptor-like protein kinase 179 394 - -
Lapu3g00875 446 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Lapu3g00875 446 SUPERFAMILY Protein kinase-like (PK-like) 85 387 IPR011009 -
Lapu3g00875 446 SMART serkin_6 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00875 446 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Lapu3g00875 446 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Lapu3g00875 446 Pfam Protein kinase domain 107 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00875 Lapu-Chr3 9350885 9352225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00875 1 398 Receptor kinase-like Gene Family AT5G20050 64.838 2.74e-180 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu3g00875 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00875 - - gmx:100779485 788.875