Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00844 ATGGACATCATTGCTGTGATTATAACTTTCCTGTTGCTCATGTCTGTAGGCACAAGAGTTGAAACGCAGCAGATAGCTCTCGGTGACACACTTGCACCACATAGTACTACCACTACTCCTGCTTTCTGGCTTTCTCCTTCTGCTCAATTTGCATTTGGTTTTTATTCACAAGAACAAGATGGTGGCTTTGTCGTCGCAATTTGGCTGGTCAGCAGGCAGAACAGGACAGTGGTATGGACTGCACTACGGAACGATCCTCCTGTAACCTCAGGTGCAAAGCTACAACTAAACATGGATGGTAAACTCGTACTAACAGACGAGCAAGGAGAAGAGAAGGTTATTGCTGATAATTCCACTGCAAAAGCTGTCTCTGCCTCCCTGCTCGATTCTGGAAACTTTGTGCTGTACAACAGTAATAACAACATCATATGGCAAAGTTTCGATTATCCAACAAATACTTTGTTAGGTGGTCAATCTCTTCCAAATGGACATCAACTGGTGTGCGATTCATCAAAGAACAGCCACTCAAGAGGACGGTTTCGTCTCAAGATGCAGGATGATGGAACTCTTGTTCTGTATCCCGTGGACACAGCTGACACAGGAACGAATGCTTACTGGACCTCTGATAGTATCCTTAATCTTGGTAACAAAACTCAGCGCTATCTCGACCAAAATGGCACACTGCGGATTCTGAATGACAGTAGTGATGGCATAACTAGGGAGATTCTAAGTGTAGTCAGTGATTCATCTTTGGCTAATGATGGAAACCGGATCGTTTATCGTGCAACCCTGAATCATGATGGGGTATTTGGGCTATATGCACACTTGAAGAATGGTAGTATCCAAAATTTGGCACATTGGCCGCATATTAAAAACATTTGTTCAGTAAAAGGATTTTGTGGGTTCAACAGCTACTGCACATTCGATGACCTTGAACCAGTGTGCTCTTGTCTCTCGGGTTTTATCTCCATACATCTAAACGACACCACTCTGGGCTGCAGAAGAAGCTTTCTGAAAGAAGATTGTAGGGGGAAGAAAGATAGCGCAACCTCTTATGAGATGAAGTCGATGGAGAATATTGCGTGGGTGGATGTTCCTTATTTCAAGGCTGAAATGTCACAAGAAGATTGCTCCGCTACTTGCTTGGCTGATTGCAATTGCGAGGCTGCATTTCATGACGGTACAAGCTGCGTGAAGCAAAGGCTGCCTTTGAGATATCTCAGACGGACATTAGAAAATGAAATTAACACAGTGCTATTGTGGAAAGTGGGACACAGCATCACGAATCGGACGGGGAACGATAATCCTGTGCCTCAACAACCACCAATCAAGGCAACAAGTAATAAAGCAACGGTGCGTATTATTGTCATCACATCCATATTTTCTCTGCTTTTATGTTCAATCATTGTCATCTCCAGCCACTACACGTACAAGATTCGGCTATTGAAGTATAAAAGATTGATGGAAAGTGGGAACTTGGGCCTGAATGAAGAGGTGACTTTGAGAAGGTTTTCATACAGTGAACTCAAAAGAGCGACAAATAATTTCAAGAAAGAACTGGGAAAAGGGTCTTTCGGAGCAGTTTACAAGGGGGCGTTGGACAAAGGTAAGAGGTTGATTGCAGTGAAGAGATTGGAGAAATTAGTGGAAGAAGGAGAAAGGGAGTTCCAAGCAGAAATGAGAGTCATTGGAAAAACCCACCACAGGAATCTAGTTCGTTTGTTGGGTTTCTGTGCGGAGGGTTCCAAAAGGCTTCTGGTGTATGAATACATGTCCAATGGCTCCCTTGGAAACCTTATCTTTGTGGGTCGAGGTCGGAGACGTCCAGAGTGGGATGAGAGAGTAAGAATAGCGGTAGAGATTGCCAGAGGGTTAATGTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATCTTGGTGGATGAGTTCTGGACTGCCAAAATATCTGATTTTGGGCTAGCAAAACTTCTCATGCCCGATCAAACCAGAACCATGACAGGGGCTAGAGGGACAAGAGGGTACGTGGCCCCTGAATGGAACAAGAATGTCCCCATATCTGTCAAGACTGATGTTTATAGTTATGGAATAATGCTGTTGGAAATTTTATGTTGCAGAAGAAACTTCGAAGTTCATGTCTCTGAACCTGAGGCGGTTCTTCTCACCACCTGGGCTTATAACTGTTTTGTTTCCGGAAAACTCAACAAGCTTTTTCCTTGGGAAGTGGTGGATGACAAAACTGCCGTGGAAAACATGCTTAAAGTGGCACTTTGGTGTGTCCAAGATGAACCTTTTCTGCGCCCAACAATGAAGAGTGTGGTATTGATGTTTGAAGGGGTCACGGACATAGCAATTCCTCCTTGTCCCGCTACTAATTCTAGTTGA 2406 0.4393 MDIIAVIITFLLLMSVGTRVETQQIALGDTLAPHSTTTTPAFWLSPSAQFAFGFYSQEQDGGFVVAIWLVSRQNRTVVWTALRNDPPVTSGAKLQLNMDGKLVLTDEQGEEKVIADNSTAKAVSASLLDSGNFVLYNSNNNIIWQSFDYPTNTLLGGQSLPNGHQLVCDSSKNSHSRGRFRLKMQDDGTLVLYPVDTADTGTNAYWTSDSILNLGNKTQRYLDQNGTLRILNDSSDGITREILSVVSDSSLANDGNRIVYRATLNHDGVFGLYAHLKNGSIQNLAHWPHIKNICSVKGFCGFNSYCTFDDLEPVCSCLSGFISIHLNDTTLGCRRSFLKEDCRGKKDSATSYEMKSMENIAWVDVPYFKAEMSQEDCSATCLADCNCEAAFHDGTSCVKQRLPLRYLRRTLENEINTVLLWKVGHSITNRTGNDNPVPQQPPIKATSNKATVRIIVITSIFSLLLCSIIVISSHYTYKIRLLKYKRLMESGNLGLNEEVTLRRFSYSELKRATNNFKKELGKGSFGAVYKGALDKGKRLIAVKRLEKLVEEGEREFQAEMRVIGKTHHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGNLIFVGRGRRRPEWDERVRIAVEIARGLMYLHEECEAPIIHCDIKPQNILVDEFWTAKISDFGLAKLLMPDQTRTMTGARGTRGYVAPEWNKNVPISVKTDVYSYGIMLLEILCCRRNFEVHVSEPEAVLLTTWAYNCFVSGKLNKLFPWEVVDDKTAVENMLKVALWCVQDEPFLRPTMKSVVLMFEGVTDIAIPPCPATNSS* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00844 801 SMART serkin_6 514 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00844 801 Coils Coil 542 562 - -
Lapu3g00844 801 Pfam Protein kinase domain 516 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00844 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 792 - -
Lapu3g00844 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 148 - -
Lapu3g00844 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Lapu3g00844 801 FunFam S-receptor-like serine/threonine-protein kinase 484 590 - -
Lapu3g00844 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 209 IPR036426 -
Lapu3g00844 801 ProSiteProfiles Protein kinase domain profile. 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00844 801 Gene3D Phosphorylase Kinase; domain 1 492 590 - -
Lapu3g00844 801 SUPERFAMILY Protein kinase-like (PK-like) 498 784 IPR011009 -
Lapu3g00844 801 Gene3D - 23 148 IPR036426 -
Lapu3g00844 801 SMART blect_4 34 150 IPR001480 -
Lapu3g00844 801 Gene3D - 150 288 IPR036426 -
Lapu3g00844 801 Gene3D Transferase(Phosphotransferase) domain 1 591 792 - -
Lapu3g00844 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Lapu3g00844 801 CDD STKc_IRAK 520 786 - -
Lapu3g00844 801 Pfam D-mannose binding lectin 76 160 IPR001480 -
Lapu3g00844 801 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Lapu3g00844 801 ProSiteProfiles Bulb-type lectin domain profile. 22 148 IPR001480 -
Lapu3g00844 801 CDD B_lectin 44 150 IPR001480 -
Lapu3g00844 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 796 - -
Lapu3g00844 801 ProSiteProfiles Bulb-type lectin domain profile. 151 285 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00844 Lapu-Chr3 9099100 9101505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00844 501 786 Receptor kinase-like Gene Family AT1G60800 42.466 1.30e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu3g00844 Pkinase 8.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00844 - - gmx:100815958 1137.09