Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00771 ATGTTGCGAGTGAAGGAAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCCGTGTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTCCCTCTCTACTCTCATTCTTTGAAATCCGTTTTGGGGTTCAACCAGAGCCAAATTACTCTGCTTGGTGTTGCCAACGATATTGGTGAGAATGTTGGCATTCTTCCCGGTCTCGCCTGCAACAAGTTCCCCCCTTGGCTCATTCTTCTCATTGGTGGTCTCTTATCATTCCTTGGTTTTGGTGTTCTCTGGCTTGCTATTTCTAAAACATTTGATTCCGTTCCTTTCATCTTGCTATGGCTTGCGCTTGCTGTGGCTACCAACAGCTGTGCATGGTTATCTACTGCCATTCTAGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAGTCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACTGAAATTTACAGCGTGGGTTTTCACAATTCTTCACCCAAATTCCTGTTGTTCCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGCACTCCTGCTTCTGGTGAAGATTCTTCTGAAAACAGGCATTTTCTGTTCATCCAAGCTACTAGTGCAGCCTTGGGTTTATACTTACTTGCAACAACAATACTTGACAACTTTGTGCCCATAAGTGATACAGTATCATATATTATGTTGGCTGTGATGATTCTCCTTCTCTTGGCTCCCCTTGCTATCCCTATAAAGATGACACTGTGTCCCAGAAAAACATCTGCATCAGAAACACCAGAGCAACTTGTTGGATCTTCCGATTTTCTGGTTGAAGATGGCAAGGTGGACAACATAGAGCCCTTGCTATCATCTTCATCAACCAGTGGCCTTGGAAGTTTTACTGATGTGGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAAAGAGGGGAAGATTTTAAGTTTACCGAGGCTCTCGTAAAGGCAGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACCGGGGTTACTGTTCTTAATAATTTGGCTCAAATAGGCATTGCACAAGGTATGGAAGATACCACAATTTTGCTGTCCCTATTCAGCTTTTTCAATTTTGTGGGTCGGCTAGGTGGAGGAGTTGTTTCAGAACATTTTGTCCGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATGTTCTTATACCTTCTCTTTGCCTATGCTATCAATGGAACCCTTTATCCCGCAATTGCAATTCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTGTTTGGTTTGAAACACTTCGGTTTGTTGAGCAACTTCATGGGTTTGGGGAACCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGACACATATATGATAATGAGGCAGCAAAACAACACGGTGTAGGCCTCATTGCTTCAGGTGTTGCATGTATGGGTCCAAGTTGTTTTAAGCTAACTTTTTTGACTCTGGCTGGTGTGTGTGTTGCGGGTACCCTCTCCAGCATTGTCTTGACCATAAGAATTAAGCCCGTTTACCAAATGCTTTATTCCGGGGGTTCGTTTAAGCTACCTCAAACTTCAGGCCACTAA 1716 0.4441 MLRVKEGKRPPWVGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILLIGGLLSFLGFGVLWLAISKTFDSVPFILLWLALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGVLKGYSGLSAAVFTEIYSVGFHNSSPKFLLFLAIGIPALCFSTMFLVRPCTPASGEDSSENRHFLFIQATSAALGLYLLATTILDNFVPISDTVSYIMLAVMILLLLAPLAIPIKMTLCPRKTSASETPEQLVGSSDFLVEDGKVDNIEPLLSSSSTSGLGSFTDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTIWMTCTQIIMMFLYLLFAYAINGTLYPAIAILGICYGVQFSIVIPTVSELFGLKHFGLLSNFMGLGNPLGALLFSALLAGHIYDNEAAKQHGVGLIASGVACMGPSCFKLTFLTLAGVCVAGTLSSIVLTIRIKPVYQMLYSGGSFKLPQTSGH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00771 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Lapu3g00771 571 Pfam Nodulin-like 11 258 IPR010658 -
Lapu3g00771 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Lapu3g00771 571 CDD MFS_Mch1p_like 10 540 - -
Lapu3g00771 571 Gene3D MFS general substrate transporter like domains 347 554 IPR036259 -
Lapu3g00771 571 Gene3D MFS general substrate transporter like domains 1 194 IPR036259 -
Lapu3g00771 571 SUPERFAMILY MFS general substrate transporter 227 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00771 Lapu-Chr3 8144467 8149623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00771 2 571 Nodulin-like Gene Family AT1G80530 57.692 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00771 - - gmx:100787328 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00771 3 8144467 8149623 Lapu3g00771 3 8144467 8149623 ECH
Lapu3g00771 3 8144467 8149623 Lapu9g00268 9 2621799 2626033 PCT